RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 KIAA2013Q8IYS2 634 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 NSUN7Q8NE18 718 aaKnown RBP6.04□□□□□ -1.44
PDE4D-229ENST00000638939 DEPTORQ8TB45 409 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 BSNDQ8WZ55 320 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 RABGGTAQ92696 567 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 KIFAP3Q92845 792 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 CLDN23Q96B33 292 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 ELSPBP1Q96BH3 223 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 NACC1Q96RE7 527 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 KXD1Q9BQD3 176 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 RPP25Q9BUL9 199 aaKnown RBP6.04□□□□□ -1.44
PDE4D-229ENST00000638939 FAM126AQ9BYI3 521 aaPredicted RBP6.04□□□□□ -1.44
PDE4D-229ENST00000638939 SPATA6Q9NWH7 488 aaPredicted RBP6.04□□□□□ -1.44
PDE4D-229ENST00000638939 HCFC1R1Q9NWW0 138 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 SNTG2Q9NY99 539 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 MAP10Q9P2G4 905 aa6.04□□□□□ -1.44
PDE4D-229ENST00000638939 SMG5Q9UPR3 1016 aaKnown RBP6.04□□□□□ -1.44
PDE4D-229ENST00000638939 CEP192Q8TEP8 1941 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 FAM208BQ5VWN6 2430 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ARHGEF35A5YM69 484 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 BTBD18B2RXH4 712 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 SYN3O14994 580 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 NCAM2O15394 837 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TRAPPC3O43617 180 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 LRRN2O75325 713 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 MED24O75448 989 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 B3GAT3O94766 335 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 MICAL2O94851 1124 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 LARGE1O95461 756 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 RHOP08100 348 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 OR52Z1P0C646 297 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 FCARP24071 287 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TARSP26639 723 aaKnown RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TKTP29401 623 aaKnown RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 OR1D2P34982 312 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 GRM5P41594 1212 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 CLCNKBP51801 687 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ROR1Q01973 937 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 LMNB2Q03252 620 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 DPYDQ12882 1025 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 USP4Q13107 963 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 UBXN2BQ14CS0 331 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 SLC5A9Q2M3M2 681 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 SLC44A4Q53GD3 710 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 XKR4Q5GH76 650 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 GLRA4Q5JXX5 417 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 PRSS36Q5K4E3 855 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ZBTB41Q5SVQ8 909 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ATF7IP2Q5U623 682 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 EEF1DP3Q658K8 133 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TPRG1Q6ZUI0 275 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 BPHLQ86WA6 291 aaPredicted RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 NOSTRINQ8IVI9 506 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 C3orf58Q8NDZ4 430 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ZNF461Q8TAF7 563 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ERMNQ8TAM6 284 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 SECISBP2LQ93073 1101 aaKnown RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 NELL2Q99435 816 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 SPSB2Q99619 263 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 CXCL16Q9H2A7 254 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TMEM60Q9H2L4 133 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TRPV5Q9NQA5 729 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 TOPORSQ9NS56 1045 aaPredicted RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 SLC38A7Q9NVC3 462 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ZSCAN32Q9NX65 697 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 NCDNQ9UBB6 729 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 DNMT3BQ9UBC3 853 aaKnown RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 MAFFQ9ULX9 164 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 POLIQ9UNA4 740 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 MRPS17Q9Y2R5 130 aaKnown RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 MRPS23Q9Y3D9 190 aaKnown RBP6.03□□□□□ -1.44
PDE4D-229ENST00000638939 CDY1Q9Y6F8 540 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 ZZEF1O43149 2961 aa6.03□□□□□ -1.44
PDE4D-229ENST00000638939 WDR27A2RRH5 827 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 SHISA7A6NL88 538 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 FAM170BA6NMN3 283 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 PRR5-ARHGAP8B1AHC4 643 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 TBC1D4O60343 1298 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ABLIM3O94929 683 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 LRG1P02750 347 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 TDGF1P13385 188 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ATF2P15336 505 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 KCNE1P15382 129 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 CEBPBP17676 345 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 MCM7P33993 719 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 TRAPPC10P48553 1259 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 MMP16P51512 607 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 EPHA5P54756 1037 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ARHGAP8P85298 464 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ADCY1Q08828 1119 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 FZD5Q13467 585 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ME3Q16798 604 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ZNF568Q3ZCX4 644 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 NT5DC1Q5TFE4 455 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 TPGS2Q68CL5 300 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 CD300LGQ6UXG3 332 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ALKAL1Q6UXT8 129 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 ZNF852Q6ZMS4 543 aa6.02□□□□□ -1.45
PDE4D-229ENST00000638939 MAEAQ7L5Y9 396 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms