RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
CACNA1A-252ENST00000637832 CACNG4Q9UBN1 327 aa13.07□□□□□ -0.32
CACNA1A-252ENST00000637832 DSEQ9UL01 958 aa13.07□□□□□ -0.32
CACNA1A-252ENST00000637832 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-252ENST00000637832 NT5C1B-RDH14C9J2C7 533 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 FGF18O76093 207 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 TRIM21P19474 475 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 RFX1P22670 979 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 TBXAS1P24557 533 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 PBX2P40425 430 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 YWHAEP62258 255 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 TAP1Q03518 808 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 KIAA1841Q6NSI8 718 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 FUT10Q6P4F1 479 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 TRIM65Q6PJ69 517 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 APTXQ7Z2E3 356 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 METTL23Q86XA0 190 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 APPL2Q8NEU8 664 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 FAXDC2Q96IV6 333 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 CRACR2AQ9BSW2 395 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 TRIM5Q9C035 493 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 NIF3L1Q9GZT8 377 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 GDAP2Q9NXN4 497 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 NXF1Q9UBU9 619 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 MTUS1Q9ULD2 1270 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 DAAM1Q9Y4D1 1078 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 TNRC18O15417 2968 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-252ENST00000637832 SCN1AP35498 2009 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 TMEM265A0A087WTH1 108 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 C5orf67F2Z3F1 127 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 CYB561D2O14569 222 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PPEF2O14830 753 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 SYN3O14994 580 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 AARSP49588 968 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 ERVK-21P61565 698 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PLCB3Q01970 1234 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 UBE3AQ05086 875 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 SYCP1Q15431 976 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 DPH6Q7L8W6 267 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 TMEM86AQ8N2M4 240 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PPM1KQ8N3J5 372 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 TTC39CQ8N584 583 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 TOP6BLQ8N6T0 577 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 CXorf38Q8TB03 319 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 SENP8Q96LD8 212 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PI4K2AQ9BTU6 479 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 LZTS1Q9Y250 596 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
CACNA1A-252ENST00000637832 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 M0QZQ0 153 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 ITGB1P05556 798 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 URODP06132 367 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 PON1P27169 355 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 BRCC3P46736 316 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 MFAP3P55082 362 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 CREMQ03060 361 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 LRMPQ12912 555 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 NR1I3Q14994 352 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 USP41Q3LFD5 358 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 TIGD5Q53EQ6 642 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 FAM171A1Q5VUB5 890 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 KLHL23Q8NBE8 558 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 SPATA18Q8TC71 538 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 SEMA4DQ92854 862 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 LSM14BQ9BX40 385 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-252ENST00000637832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.04□□□□□ -0.327e-11■■■■■ 260.8
CACNA1A-252ENST00000637832 F8W810 466 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 H7C4K7 107 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 I3L4J1 428 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 SPTLC1O15269 473 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 LPXNO60711 386 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 SOD2P04179 222 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 TPM1P09493 284 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 LINC00271P0C7V0 271 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 SLC9A1P19634 815 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 TYMPP19971 482 aa13.03□□□□□ -0.32
CACNA1A-252ENST00000637832 GLUD2P49448 558 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms