RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 DENND2CQ68D51 928 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 RSPH1Q8WYR4 309 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 RUBCNQ92622 972 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 ATP2A3Q93084 1043 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 FDXACB1Q9BRP7 624 aaPredicted RBP5.86□□□□□ -1.47
CHD2-227ENST00000637572 C11orf70Q9BRQ4 267 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
CHD2-227ENST00000637572 SETD4Q9NVD3 440 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 MORF4L1Q9UBU8 362 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 FZD1Q9UP38 647 aa5.86□□□□□ -1.47
CHD2-227ENST00000637572 TOGARAM1Q9Y4F4 1720 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 MOCS3O95396 460 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 LSM8O95777 96 aaKnown RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 THP07101 528 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 TMEM253P0C7T8 217 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SETSIPP0DME0 302 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CPB1P15086 417 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 GCNT1Q02742 428 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CAV1Q03135 178 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 EML3Q32P44 896 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 TRIM65Q6PJ69 517 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 KIAA0895Q8NCT3 520 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CDKL2Q92772 493 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 ZNF668Q96K58 619 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 FAM124BQ9H5Z6 455 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 PDE11AQ9HCR9 933 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 ASTN2O75129 1339 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 ZDBF2Q9HCK1 2354 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SMIM35A0A1B0GVV1 85 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 F8W8V4 182 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CYP26A1O43174 497 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 APOEP02649 317 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 ZNF286BP0CG31 522 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 VDRP11473 427 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 POU5F1Q01860 360 aaKnown RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 EFHC1Q5JVL4 640 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 TSEN2Q8NCE0 465 aaKnown RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 DNAJC7Q99615 494 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 NUP85Q9BW27 656 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 NGRNQ9NPE2 291 aaKnown RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 DNAAF2Q9NVR5 837 aaKnown RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 BTBD7Q9P203 1132 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 ZMYND8Q9ULU4 1186 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 EFCAB14O75071 495 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 KCNA2P16389 499 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 GNL1P36915 607 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 ARHGAP25P42331 645 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 ALDH7A1P49419 539 aaKnown RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 FLT3LGP49771 235 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 GFPT1Q06210 699 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 CUL1Q13616 776 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SLMAPQ14BN4 828 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 PLCB4Q15147 1175 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 NFE2Q16621 373 aaPredicted RBP5.85□□□□□ -1.47
CHD2-227ENST00000637572 EFHC2Q5JST6 749 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 NAA35Q5VZE5 725 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 PCGF5Q86SE9 256 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SCN4BQ8IWT1 228 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 NDUFAF2Q8N183 169 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SPATA20Q8TB22 786 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 AFAP1L1Q8TED9 768 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 EXOC4Q96A65 974 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 DNAJC19Q96DA6 116 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 MAML3Q96JK9 1138 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CBWD1Q9BRT8 395 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 CALN1Q9BXU9 219 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SAMD15Q9P1V8 674 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 SLC27A5Q9Y2P5 690 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 UMODL1Q5DID0 1318 aa5.85□□□□□ -1.47
CHD2-227ENST00000637572 IGLV3-22A0A075B6J6 115 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 AKAP3O75969 853 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 SPATA31C1P0DKV0 1188 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 KRT3P12035 628 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 EIF4BP23588 611 aaKnown RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 SERPINB6P35237 376 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 CRYBB1P53674 252 aaPredicted RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 NCKAP1LP55160 1127 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 POU5F1BQ06416 359 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 TMEM62Q0P6H9 643 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 ITGB3BPQ13352 177 aaPredicted RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 LDLRAD1Q5T700 205 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 IER5LQ5T953 404 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 BTBD8Q5XKL5 378 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 CBWD2Q8IUF1 395 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 PALM2Q8IXS6 379 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 C17orf53Q8N3J3 647 aaPredicted RBP5.84□□□□□ -1.47
CHD2-227ENST00000637572 IL31RAQ8NI17 732 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 FAM76AQ8TAV0 307 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.84□□□□□ -1.471e-6■■■■■ 56.2
CHD2-227ENST00000637572 UROC1Q96N76 676 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 PPP1R2P1Q96PQ5 205 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 KRT12Q99456 494 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 GPR20Q99678 358 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 INTS13Q9NVM9 706 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 RBPJLQ9UBG7 517 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 FBXL5Q9UKA1 691 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 GTF3C4Q9UKN8 822 aa5.84□□□□□ -1.47
CHD2-227ENST00000637572 FHOD1Q9Y613 1164 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms