RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IQCEQ6IPM2 695 aa20.08■□□□□ 0.81
CLN6-220ENST00000637450 MAML2Q8IZL2 1156 aaPredicted RBP20.08■□□□□ 0.81
CLN6-220ENST00000637450 HS6ST3Q8IZP7 471 aa20.08■□□□□ 0.81
CLN6-220ENST00000637450 FIZ1Q96SL8 496 aa20.08■□□□□ 0.81
CLN6-220ENST00000637450 BCO2Q9BYV7 579 aa20.08■□□□□ 0.81
CLN6-220ENST00000637450 RPF1Q9H9Y2 349 aaKnown RBP20.08■□□□□ 0.81
CLN6-220ENST00000637450 LTB4R2Q9NPC1 389 aa20.08■□□□□ 0.81
CLN6-220ENST00000637450 EP300Q09472 2414 aaPredicted RBP20.08■□□□□ 0.8
CLN6-220ENST00000637450 CITO14578 2027 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 XPOTO43592 962 aaKnown RBP20.07■□□□□ 0.8
CLN6-220ENST00000637450 MOSPD3O75425 235 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 KRT18P05783 430 aaKnown RBP20.07■□□□□ 0.8
CLN6-220ENST00000637450 GUCY2FP51841 1108 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 EPHA5P54756 1037 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 GTF2BQ00403 316 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 SPATA1Q5VX52 437 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 SLC39A4Q6P5W5 647 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 CD302Q8IX05 232 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 KCNG4Q8TDN1 519 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 ASB16Q96NS5 453 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 NELL2Q99435 816 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 ZFP14Q9HCL3 533 aa20.07■□□□□ 0.8
CLN6-220ENST00000637450 CPSF3Q9UKF6 684 aaKnown RBP20.07■□□□□ 0.8
CLN6-220ENST00000637450 MYH15Q9Y2K3 1946 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 CACNA1IQ9P0X4 2223 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 VNN2O95498 520 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 DDIT3P35638 169 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 ZC3H14Q6PJT7 736 aaKnown RBP20.06■□□□□ 0.8
CLN6-220ENST00000637450 DSTYKQ6XUX3 929 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 TPRG1Q6ZUI0 275 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 USP37Q86T82 979 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 LEMD2Q8NC56 503 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 RASSF8Q8NHQ8 419 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 CLDN23Q96B33 292 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 ZSWIM3Q96MP5 696 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 MSTO1Q9BUK6 570 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 CCSER1Q9C0I3 900 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 HEBP1Q9NRV9 189 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 ZNF292O60281 2723 aa20.06■□□□□ 0.8
CLN6-220ENST00000637450 OR6C75A6NL08 312 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 SHISA7A6NL88 538 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 PPEF2O14830 753 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 OR4Q2P0C623 313 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 TYMPP19971 482 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 NMT1P30419 496 aaKnown RBP20.05■□□□□ 0.8
CLN6-220ENST00000637450 ABCD1P33897 745 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 MAGEA9P43362 315 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 LILRA4P59901 499 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 GPR17Q13304 367 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 JADE1Q6IE81 842 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 ZNF852Q6ZMS4 543 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 MAP4K3Q8IVH8 894 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 LARP4BQ92615 738 aaKnown RBP20.05■□□□□ 0.8
CLN6-220ENST00000637450 DNASE1L2Q92874 299 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 SMARCD2Q92925 531 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 ZHX3Q9H4I2 956 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 ASAH2Q9NR71 780 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 SPATA6Q9NWH7 488 aaPredicted RBP20.05■□□□□ 0.8
CLN6-220ENST00000637450 FBXO4Q9UKT5 387 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 YIPF1Q9Y548 306 aa20.05■□□□□ 0.8
CLN6-220ENST00000637450 COL4A3Q01955 1670 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 ANKRD63C9JTQ0 380 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 TBCAO75347 108 aaKnown RBP20.04■□□□□ 0.8
CLN6-220ENST00000637450 MYL4P12829 197 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 PAX3P23760 479 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 TARSP26639 723 aaKnown RBP20.04■□□□□ 0.8
CLN6-220ENST00000637450 FZD5Q13467 585 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 CUL4AQ13619 759 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 MYBPC2Q14324 1141 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 GRM2Q14416 872 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 ZNF528Q3MIS6 628 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 OVOS1Q6IE37 1185 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 FAM212AQ96EL1 285 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 PGLYRP2Q96PD5 576 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 TRMT61BQ9BVS5 477 aaKnown RBP20.04■□□□□ 0.8
CLN6-220ENST00000637450 LRRC3Q9BY71 257 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 CRISPLD1Q9H336 500 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 ST6GALNAC4Q9H4F1 302 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 TRPV4Q9HBA0 871 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 DERAQ9Y315 318 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 FRYLO94915 3013 aa20.04■□□□□ 0.8
CLN6-220ENST00000637450 MYH11P35749 1972 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 PIRO00625 290 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 SPTLC1O15269 473 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 NCAM2O15394 837 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 LAMTOR5O43504 91 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 GJA1P17302 382 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 RPS9P46781 194 aaKnown RBP20.03■□□□□ 0.8
CLN6-220ENST00000637450 DUSP4Q13115 394 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 PLD1Q13393 1074 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 ZC2HC1CQ53FD0 456 aaPredicted RBP20.03■□□□□ 0.8
CLN6-220ENST00000637450 C9orf57Q5W0N0 161 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 CENPPQ6IPU0 288 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 IRF7Q92985 503 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 EPSTI1Q96J88 318 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 SENP8Q96LD8 212 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 GPR88Q9GZN0 384 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 BRD9Q9H8M2 597 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 TRPV5Q9NQA5 729 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 MRPS17Q9Y2R5 130 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms