RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SPATS2LQ9NUQ6 558 aaKnown RBP12.28□□□□□ -0.44
CLN6-217ENST00000636964 DAAM1Q9Y4D1 1078 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
CLN6-217ENST00000636964 FAM189A1O60320 539 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.44
CLN6-217ENST00000636964 MMP3P08254 477 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 LSP1P33241 339 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 FMO1Q01740 532 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 TNFAIP2Q03169 654 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 MBTD1Q05BQ5 628 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 RBBP5Q15291 538 aaKnown RBP12.27□□□□□ -0.44
CLN6-217ENST00000636964 RPS6KA1Q15418 735 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 KCTD19Q17RG1 926 aaPredicted RBP12.27□□□□□ -0.44
CLN6-217ENST00000636964 ZNF484Q5JVG2 852 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 TLDC1Q6P9B6 456 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 SPATA4Q8NEY3 305 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 ZNF473Q8WTR7 871 aaKnown RBP12.27□□□□□ -0.44
CLN6-217ENST00000636964 SCLT1Q96NL6 688 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 ZIM3Q96PE6 472 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 CGRRF1Q99675 332 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 C2orf40Q9H1Z8 148 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 SETD4Q9NVD3 440 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 COG5Q9UP83 839 aa12.27□□□□□ -0.44
CLN6-217ENST00000636964 DNAH12Q6ZR08 3092 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 SLC15A5A6NIM6 579 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 GOLGA8KD6RF30 607 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 ACKR2O00590 384 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 ABLIM1O14639 778 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 OGTO15294 1046 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 TMEM253P0C7T8 217 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 PAFAH1B1P43034 410 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 PDE6CP51160 858 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 TFAMQ00059 246 aaKnown RBP12.27□□□□□ -0.45
CLN6-217ENST00000636964 HHATQ5VTY9 493 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 C6orf89Q6UWU4 347 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 PEX26Q7Z412 305 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 PHLDB2Q86SQ0 1253 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 FZD8Q9H461 694 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 ANKRD62A6NC57 917 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 ZEB2O60315 1214 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 FGFR4P22455 802 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 NCOA4Q13772 614 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 IFI16Q16666 785 aaKnown RBP12.27□□□□□ -0.45
CLN6-217ENST00000636964 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.45
CLN6-217ENST00000636964 MTHFD1LQ6UB35 978 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 BRSK2Q8IWQ3 736 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 RFFLQ8WZ73 363 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 KCNN1Q92952 543 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 VTI1AQ96AJ9 217 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 YIPF2Q9BWQ6 316 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 CTTNBP2NLQ9P2B4 639 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 INTUQ9ULD6 942 aa12.27□□□□□ -0.45
CLN6-217ENST00000636964 TMEM110-MUSTN1A8MSY1 372 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 PEX14O75381 377 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 MCM3P25205 808 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 MCL1Q07820 350 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 TBC1D25Q3MII6 688 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 C2CD6Q53TS8 623 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 MPZL3Q6UWV2 235 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 TAF4BQ92750 862 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 BLOC1S6Q9UL45 172 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 GPR25O00155 361 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 GCNT1Q02742 428 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 PPARDQ03181 441 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 MAP2K5Q13163 448 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 GRIK4Q16099 956 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 DGKDQ16760 1214 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 TMEM270Q6UE05 265 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 YTHDF3Q7Z739 585 aaKnown RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 FAM49AQ9H0Q0 323 aaPredicted RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 RBM12Q9NTZ6 932 aaKnown RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 CPSF3Q9UKF6 684 aaKnown RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 SIP14410 1827 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 DNM1LO00429 736 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 SKAP2O75563 359 aaPredicted RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 CXCL8P10145 99 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 RPS6KA3P51812 740 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 NOP14P78316 857 aaKnown RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 CDR2Q01850 454 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 MARCH8Q5T0T0 291 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 IQSEC1Q6DN90 963 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 DDX1Q92499 740 aaKnown RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 EMID1Q96A84 441 aaPredicted RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 TACO1Q9BSH4 297 aaKnown RBP12.26□□□□□ -0.45
CLN6-217ENST00000636964 ISCUQ9H1K1 167 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 TMEM165Q9HC07 324 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 PTPRHQ9HD43 1115 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 PCDHB4Q9Y5E5 795 aa12.26□□□□□ -0.45
CLN6-217ENST00000636964 A0A0A6YYK5 440 aaPredicted RBP12.25□□□□□ -0.45
CLN6-217ENST00000636964 ASAP2O43150 1006 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CEP104O60308 925 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 CFHP08603 1231 aa12.25□□□□□ -0.45
CLN6-217ENST00000636964 PHKA2P46019 1235 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms