RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 SYCP3Q8IZU3 236 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 GPR152Q8TDT2 470 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 FGF14Q92915 247 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 CORO1BQ9BR76 489 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 OXCT2Q9BYC2 517 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 OLFML3Q9NRN5 406 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 PANK4Q9NVE7 773 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 AFF4Q9UHB7 1163 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 CA14Q9ULX7 337 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 PCDHB13Q9Y5F0 798 aa16.27■□□□□ 0.2
CACNA1A-230ENST00000636768 OR6C75A6NL08 312 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 YEATS4O95619 227 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 ODC1P11926 461 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 AOC1P19801 751 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 PAX3P23760 479 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 MRE11P49959 708 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 LILRA4P59901 499 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 KCNA1Q09470 495 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 ALCAMQ13740 583 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 C9orf57Q5W0N0 161 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 OVOS1Q6IE37 1185 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 RNF19BQ6ZMZ0 732 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 CCDC65Q8IXS2 484 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 LRRC27Q9C0I9 530 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 MAFFQ9ULX9 164 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 C2CD2Q9Y426 696 aa16.26■□□□□ 0.19
CACNA1A-230ENST00000636768 CITO14578 2027 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 KRBA1A5PL33 1030 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 CUTAO60888 179 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 IL18RAPO95256 599 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 OR4Q2P0C623 313 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 ZSCAN22P10073 491 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 NPR3P17342 541 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 TYMPP19971 482 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 ADSSP30520 456 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 CASP5P51878 434 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 POU5F1Q01860 360 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 TWF1Q12792 350 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 SLC5A9Q2M3M2 681 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 PDZD4Q76G19 769 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 NOC3LQ8WTT2 800 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 ATOH1Q92858 354 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 DHX58Q96C10 678 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 SAAL1Q96ER3 474 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 MCRS1Q96EZ8 462 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 SENP8Q96LD8 212 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 ZNF512Q96ME7 567 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 PGLYRP2Q96PD5 576 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 KXD1Q9BQD3 176 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 RTP3Q9BQQ7 232 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 FAM213AQ9BRX8 229 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 RPP25Q9BUL9 199 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 AVENQ9NQS1 362 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 ARHGEF3Q9NR81 526 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 SLC2A4RGQ9NR83 387 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 FAM86C1Q9NVL1 165 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 DPP3Q9NY33 737 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 WDFY4Q6ZS81 3184 aa16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 MTCL1Q9Y4B5 1905 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-230ENST00000636768 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 MYO10Q9HD67 2058 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 ANO9A1A5B4 782 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 H0Y858 1186 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 PIRO00625 290 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 ZNF197O14709 1029 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 SPTLC1O15269 473 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 F13A1P00488 732 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 CEBPBP17676 345 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 CYP4A22Q5TCH4 519 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 ARMCX5Q6P1M9 558 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 CRELD2Q6UXH1 353 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 STXBP4Q6ZWJ1 553 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 FGFBP2Q9BYJ0 223 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 CUEDC2Q9H467 287 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 TBC1D17Q9HA65 648 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 GDE1Q9NZC3 331 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 YIPF1Q9Y548 306 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 KMT2EQ8IZD2 1858 aa16.24■□□□□ 0.19
CACNA1A-230ENST00000636768 PI15O43692 258 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 PRPF6O94906 941 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 LDHAP00338 332 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 ME1P48163 572 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 TAF6P49848 677 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 GPC5P78333 572 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 ASIC1P78348 528 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 TFAMQ00059 246 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 AMPD3Q01432 767 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 PLD1Q13393 1074 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 MYBPC2Q14324 1141 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 E2F4Q16254 413 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 SHC4Q6S5L8 630 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 METTL23Q86XA0 190 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 NT5DC4Q86YG4 428 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms