RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 FAM71BQ8TC56 605 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 WHAMMQ8TF30 809 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 MAIP1Q8WWC4 291 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CASKIN2Q8WXE0 1202 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ALG3Q92685 438 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 KRT35Q92764 455 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 KAT2BQ92831 832 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ELMO3Q96BJ8 720 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 FAM212AQ96EL1 285 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PKNOX2Q96KN3 472 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 FAM84AQ96KN4 292 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 RNPC3Q96LT9 517 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 TSPAN18Q96SJ8 248 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PLVAPQ9BX97 442 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 AP1M1Q9BXS5 423 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 BCO2Q9BYV7 579 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 MTMR12Q9C0I1 747 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 LHX5Q9H2C1 402 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ADAMTS10Q9H324 1103 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 FAM114A2Q9NRY5 505 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CISHQ9NSE2 258 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PARVAQ9NVD7 372 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PSD3Q9NYI0 1048 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ADAM22Q9P0K1 906 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PCYOX1Q9UHG3 505 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CPA4Q9UI42 421 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 SIX4Q9UIU6 781 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 KIAA1257Q9ULG3 409 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 AKT3Q9Y243 479 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 C2CD2Q9Y426 696 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 SCINQ9Y6U3 715 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 UMODL1Q5DID0 1318 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 MROH7Q68CQ1 1323 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 TRIP11Q15643 1979 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 GOLGA6L10A0A0M3HER8 536 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TCRBV5S1A1TA0A578 114 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TMEM191CA6NGB0 347 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TMEM110-MUSTN1A8MSY1 372 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 H3BQF6 201 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 AGPSO00116 658 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 IGF2BP3O00425 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
NEK3-211ENST00000629912 PODXLO00592 558 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 MED7O43513 233 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SPOPO43791 374 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 OPA1O60313 960 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 KPNA6O60684 536 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 PHF2O75151 1096 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 GPR32O75388 356 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SYF2O95926 243 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 F2P00734 622 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 CALCAP01258 141 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 VTNP04004 478 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 CALB1P05937 261 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 CFHP08603 1231 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZNF286BP0CG31 522 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SMIM10L2AP0DMW4 78 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SMIM10L2BP0DMW5 78 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 CXCL8P10145 99 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 P4HA1P13674 534 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 RRM1P23921 792 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 OAS2P29728 719 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 AXLP30530 894 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 HOXA11P31270 313 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 GBP1P32455 592 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 HSPA9P38646 679 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 RGS2P41220 211 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 PTGIRP43119 386 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TNNT3P45378 269 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 ASPAP45381 313 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TM4SF4P48230 202 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 PSEN2P49810 448 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 MRPS25P82663 173 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 RBP5P82980 135 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TAP1Q03518 808 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 MAMLD1Q13495 774 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZBTB6Q15916 424 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TMEM132AQ24JP5 1023 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZNF699Q32M78 642 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 DCAF4L1Q3SXM0 396 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 HSP90B2PQ58FF3 399 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZNF667Q5HYK9 610 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SPDYCQ5MJ68 293 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 PRAMEF19Q5SWL8 479 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SEL1L2Q5TEA6 688 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 LRRC38Q5VT99 294 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 DUPD1Q68J44 220 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 JADE1Q6IE81 842 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 RGMBQ6NW40 437 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ALKAL1Q6UXT8 129 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ILDR2Q71H61 639 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SLC13A5Q86YT5 568 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 IFNL1Q8IU54 200 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TMEM192Q8IY95 271 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 WDTC1Q8N5D0 677 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 PRELID2Q8N945 189 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 CEP120Q8N960 986 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 C1orf127Q8N9H9 656 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 C12orf50Q8NA57 414 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 TMEM35BQ8NCS4 154 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms