RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	SPDEF	O95238	335 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	GC	P02774	474 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	GNAI3	P08754	354 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	CT47B1	P0C2W7	299 aa	Predicted RBP	3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	HKR1	P10072	659 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	TYR	P14679	529 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	HSPA6	P17066	643 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	KRT4	P19013	534 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	VAV2	P52735	878 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	HMGA2	P52926	109 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	USP14	P54578	494 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	GNAI1	P63096	354 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	NKX6-1	P78426	367 aa	Predicted RBP	3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	PIGF	Q07326	219 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	ZNF844	Q08AG5	666 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	KIF22	Q14807	665 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	CYP2A13	Q16696	494 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	FLYWCH1	Q4VC44	716 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	CCDC93	Q567U6	631 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	ODR4	Q5SWX8	454 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	NXN	Q6DKJ4	435 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	PCSK4	Q6UW60	755 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	ZNF627	Q7L945	461 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	TMPRSS9	Q7Z410	1059 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	SLC35G2	Q8TBE7	412 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	MARS2	Q96GW9	593 aa	Known RBP	3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	PHACTR3	Q96KR7	559 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	VRK1	Q99986	396 aa	Predicted RBP	3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	MRI	Q9BWK5	157 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	RTFDC1	Q9BY42	306 aa	Predicted RBP	3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	ALOXE3	Q9BYJ1	711 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	KRTAP4-5	Q9BYR2	181 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	BRD9	Q9H8M2	597 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	CYP4F11	Q9HBI6	524 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	NMRK2	Q9NPI5	230 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	PNPO	Q9NVS9	261 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	THRAP3	Q9Y2W1	955 aa	Known RBP	3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	MAST3	O60307	1309 aa		3.92	□□□□□ -1.78
CNOT1-223	ENST00000628857	PRAMEF33	A0A0G2JMD5	474 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	GRID2IP	A4D2P6	1211 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	PRSS29P	A6NIE9	313 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	PRAMEF10	O60809	474 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	FTL	P02792	175 aa	Predicted RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	S100B	P04271	92 aa	Predicted RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	KCNA2	P16389	499 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	LPO	P22079	712 aa	Predicted RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	PIK3CG	P48736	1102 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	MAP2K6	P52564	334 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	SCAP	Q12770	1279 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	HLX	Q14774	488 aa	Predicted RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	B3GNT9	Q6UX72	402 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	HEATR3	Q7Z4Q2	680 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	CLNK	Q7Z7G1	428 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	LCORL	Q8N3X6	602 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	LNX2	Q8N448	690 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	KLHL32	Q96NJ5	620 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	WDR11	Q9BZH6	1224 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	MRPL46	Q9H2W6	279 aa	Known RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	METTL14	Q9HCE5	456 aa	Known RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	TBCCD1	Q9NVR7	557 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	ZIM2	Q9NZV7	527 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	HSFX1	Q9UBD0	423 aa		3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857	FEZ2	Q9UHY8	353 aa	Predicted RBP	3.91	□□□□□ -1.78
CNOT1-223	ENST00000628857		A0A087X1B8	175 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	CCDC195	A0A1B0GUA6	201 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	LPXN	O60711	386 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	RAMP2	O60895	175 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	ESRRB	O95718	433 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	SRGN	P10124	158 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	FCER1A	P12319	257 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	ANXA11	P50995	505 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	RPS7	P62081	194 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	HSD11B2	P80365	405 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	DYRK1A	Q13627	763 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	HABP2	Q14520	560 aa	Predicted RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	IFIT1B	Q5T764	474 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	FAM102B	Q5T8I3	360 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857		Q6YL49	198 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	EPM2AIP1	Q7L775	607 aa	Predicted RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	TCEAL8	Q8IYN2	117 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	CFAP52	Q8N1V2	620 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	SUPT20H	Q8NEM7	779 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	POC1B	Q8TC44	478 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	DIS3L	Q8TF46	1054 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	NACC2	Q96BF6	587 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	MTFMT	Q96DP5	389 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	CHFR	Q96EP1	664 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	UNKL	Q9H9P5	680 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	LMBRD1	Q9NUN5	540 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	CTTNBP2NL	Q9P2B4	639 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	DMTF1	Q9Y222	760 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	MTO1	Q9Y2Z2	717 aa	Known RBP	3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	PCDHA3	Q9Y5H8	950 aa		3.9	□□□□□ -1.79
CNOT1-223	ENST00000628857	ERC2	O15083	957 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	PROM1	O43490	865 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	AP1G1	O43747	822 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	MATN4	O95460	622 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	TH	P07101	528 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	GJB1	P08034	283 aa		3.89	□□□□□ -1.79
CNOT1-223	ENST00000628857	RARB	P10826	455 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms