RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 NCAPGQ9BPX3 1015 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 MRPL47Q9HD33 250 aaKnown RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 GSTTP1A0A1W2PQM5 241 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 MAFGO15525 162 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 STX2P32856 288 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 MAP2K2P36507 400 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 STRN3Q13033 797 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 E2F5Q15329 346 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 P3H1Q32P28 736 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 KAZNQ674X7 775 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 SCARA3Q6AZY7 606 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 CYP4F22Q6NT55 531 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 SUN1O94901 812 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 ATP6V1G2O95670 118 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 CLTAP09496 248 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 KRT10P13645 584 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 TCF4P15884 667 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 ZFYVE27Q5T4F4 411 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 PLEKHA7Q6IQ23 1121 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 ABHD15Q6UXT9 468 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 RBBP8NLQ8NC74 664 aaPredicted RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 TGS1Q96RS0 853 aaKnown RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 RBAKQ9NYW8 714 aaPredicted RBP11.95□□□□□ -0.5
VARS2-213ENST00000625423 LGALS13Q9UHV8 139 aa11.95□□□□□ -0.5
VARS2-213ENST00000625423 CDH16O75309 829 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 KLRC2P26717 231 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 NF2P35240 595 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
VARS2-213ENST00000625423 EMC2Q15006 297 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 SEZ6Q53EL9 994 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 SPATA21Q7Z572 469 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 GLIS1Q8NBF1 620 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 BBOF1Q8ND07 529 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 EXD1Q8NHP7 514 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 NSUN6Q8TEA1 469 aaKnown RBP11.94□□□□□ -0.5
VARS2-213ENST00000625423 RBM15Q96T37 977 aaKnown RBP eCLIP11.94□□□□□ -0.52e-10■■□□□ 13.6
VARS2-213ENST00000625423 ANKFY1Q9P2R3 1169 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 H0YCG3 227 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 MAGEA4P43358 317 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 RPL7AP62424 266 aaKnown RBP11.94□□□□□ -0.5
VARS2-213ENST00000625423 NFX1Q12986 1120 aaKnown RBP11.94□□□□□ -0.5
VARS2-213ENST00000625423 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 OR5B17Q8NGF7 314 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 CCDC77Q9BR77 488 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
VARS2-213ENST00000625423 ECT2Q9H8V3 914 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 NOD2Q9HC29 1040 aa11.94□□□□□ -0.5
VARS2-213ENST00000625423 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 ZSCAN5DPP0CG00 497 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 NCALDP61601 193 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 TMED2Q15363 201 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 TMEM63BQ5T3F8 832 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 WLSQ5T9L3 541 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 MIS18BP1Q6P0N0 1132 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 ARHGEF18Q6ZSZ5 1173 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 PHF13Q86YI8 300 aaPredicted RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 FEZF2Q8TBJ5 459 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 MAGEC3Q8TD91 643 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 ASAP3Q8TDY4 903 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 VCPIP1Q96JH7 1222 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 TARS2Q9BW92 718 aaKnown RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 NKIRAS1Q9NYS0 192 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 DNPEPQ9ULA0 475 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 STYXL1Q9Y6J8 313 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 SCINQ9Y6U3 715 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 RASA4BC9J798 803 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 HGSO14964 777 aaPredicted RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 RASA4O43374 803 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 ATF7P17544 494 aaPredicted RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 KCNJ2P63252 427 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 STAT4Q14765 748 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 XKR3Q5GH77 459 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 TBC1D31Q96DN5 1066 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 MSTO1Q9BUK6 570 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 K7ERI5 159 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 LIASO43766 372 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 ATP4AP20648 1035 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 GLRA2P23416 452 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 GALNTL6Q49A17 601 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 HP1BP3Q5SSJ5 553 aaPredicted RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 CGB2Q6NT52 195 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 SAYSD1Q9NPB0 183 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 PARVAQ9NVD7 372 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 FBXO40Q9UH90 709 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 ZNF148Q9UQR1 794 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms