RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ARFGEF2Q9Y6D5 1785 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 TMEM150BA6NC51 233 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 PDGFRAP16234 1089 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 VCAM1P19320 739 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 HNRNPH1P31943 449 aaKnown RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 ARSHQ5FYA8 562 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 HEATR6Q6AI08 1181 aaKnown RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 FAM83AQ86UY5 434 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SLC40A1Q9NP59 571 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 KDM4FA0A1W2PPD8 638 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 CA8P35219 290 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 MARSP56192 900 aaKnown RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SLC15A2Q16348 729 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 TTMPQ5BVD1 217 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 IRF2BP2Q7Z5L9 587 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 LRRC71Q8N4P6 559 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 TATDN2Q93075 761 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SLC10A4Q96EP9 437 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 ALG13Q9NP73 1137 aaKnown RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 GMNNO75496 209 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SKIP12755 728 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 CDKL3Q8IVW4 592 aaPredicted RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 RIBC1Q8N443 379 aaPredicted RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 WDR18Q9BV38 432 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SYNPO2Q9UMS6 1093 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 TISP43B9A030 160 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 PIK3CDO00329 1044 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 PIK3R2O00459 728 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SOX10P56693 466 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 SMTNL2Q2TAL5 461 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 IER5Q5VY09 327 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 NIPA1Q7RTP0 329 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 PPCSQ9HAB8 311 aa14.65□□□□□ -0.06
CNOT3-210ENST00000618939 KLHL8Q9P2G9 620 aaPredicted RBP14.65□□□□□ -0.06
CNOT3-210ENST00000618939 BTNL10A8MVZ5 291 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 TLR2O60603 784 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 PROSCO94903 275 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 PYGMP11217 842 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 MRPS9P82933 396 aaKnown RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 PGM5Q15124 567 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 CLEC16AQ2KHT3 1053 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 HGSNATQ68CP4 663 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 SLC13A1Q9BZW2 595 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 USH1CQ9Y6N9 552 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 CFAP69A5D8W1 941 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 RBP3P10745 1247 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 MTM1Q13496 603 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 CHST13Q8NET6 341 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 PARD3BQ8TEW8 1205 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 ZKSCAN4Q969J2 545 aaPredicted RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 HSD17B14Q9BPX1 270 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 A8MXQ7 604 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 OPHN1O60890 802 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 HUS1O60921 280 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 GPC4O75487 556 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 PPP3CAQ08209 521 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 RPS6KA2Q15349 733 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 SYCP2LQ5T4T6 812 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 ATF7IP2Q5U623 682 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 LNX1Q8TBB1 728 aaPredicted RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 ACSF2Q96CM8 615 aaPredicted RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 DDX23Q9BUQ8 820 aaKnown RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 RANBP17Q9H2T7 1088 aaKnown RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 RAB6BQ9NRW1 208 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 HACL1Q9UJ83 578 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 APOL1O14791 398 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 SUPT20HL2P0C7V6 817 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 NCF2P19878 526 aaPredicted RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 RPS12P25398 132 aaKnown RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 NAMPTP43490 491 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 BACE1P56817 501 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 BMT2Q1RMZ1 405 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 ARL13BQ3SXY8 428 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 CYP4A22Q5TCH4 519 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 NOP9Q86U38 636 aaKnown RBP14.64□□□□□ -0.07
CNOT3-210ENST00000618939 ACAP3Q96P50 834 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 SMARCAD1Q9H4L7 1026 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 TAS2R14Q9NYV8 317 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 GGA3Q9NZ52 723 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 MID2Q9UJV3 735 aa14.64□□□□□ -0.07
CNOT3-210ENST00000618939 SPECC1L-ADORA2AF8WAN1 911 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 KCNN4O15554 427 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 LMNAP02545 664 aaKnown RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 NUDCD3Q8IVD9 361 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 KCNV2Q8TDN2 545 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 KAT5Q92993 513 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 KRT10P13645 584 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 RPL21P46778 160 aaKnown RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 SPOPLQ6IQ16 392 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 RSPH3Q86UC2 560 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 MREGQ8N565 214 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 KRT35Q92764 455 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 ERP27Q96DN0 273 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 XPO7Q9UIA9 1087 aaKnown RBP14.63□□□□□ -0.07
CNOT3-210ENST00000618939 CHMP2BQ9UQN3 213 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 CCDC195A0A1B0GUA6 201 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 RBAK-RBAKDNI3L0D1 243 aa14.63□□□□□ -0.07
CNOT3-210ENST00000618939 TGFB1I1O43294 461 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms