RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LRRC52Q8N7C0 313 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 PLEKHO2Q8TD55 490 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 IPO9Q96P70 1041 aaKnown RBP8.93□□□□□ -0.98
NEK3-209ENST00000618856 OXCT2Q9BYC2 517 aaPredicted RBP8.93□□□□□ -0.98
NEK3-209ENST00000618856 GTPBP4Q9BZE4 634 aaKnown RBP8.93□□□□□ -0.98
NEK3-209ENST00000618856 PLEKHA4Q9H4M7 779 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 PDE11AQ9HCR9 933 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 INTS13Q9NVM9 706 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 RMND1Q9NWS8 449 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 DPP3Q9NY33 737 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 DPP7Q9UHL4 492 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 SIX4Q9UIU6 781 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 FBXW11Q9UKB1 542 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 ITGA11Q9UKX5 1188 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 FAM50BQ9Y247 325 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 USP15Q9Y4E8 981 aaPredicted RBP8.93□□□□□ -0.98
NEK3-209ENST00000618856 PCDHA5Q9Y5H7 936 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 TRIOO75962 3097 aa8.93□□□□□ -0.98
NEK3-209ENST00000618856 MTCL1Q9Y4B5 1905 aaKnown RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 DENND4AQ7Z401 1863 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 TSC2P49815 1807 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 CLIC2O15247 247 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 KIF20AO95235 890 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 STAU1O95793 577 aaKnown RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 GLUD1P00367 558 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 RPL17P18621 184 aaKnown RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 BMP6P22004 513 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 HOXA9P31269 272 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 CENPPQ6IPU0 288 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 FOXR2Q6PJQ5 311 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 GPR149Q86SP6 731 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 ADHFE1Q8IWW8 467 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 APPL2Q8NEU8 664 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 OR5B17Q8NGF7 314 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 ZNF461Q8TAF7 563 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 FEZF2Q8TBJ5 459 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 CACTINQ8WUQ7 758 aaKnown RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 ZNF516Q92618 1163 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 ZNF707Q96C28 371 aaPredicted RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 FAM212AQ96EL1 285 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 UHRF1Q96T88 793 aaPredicted RBP8.92□□□□□ -0.98
NEK3-209ENST00000618856 SFXN1Q9H9B4 322 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 CD320Q9NPF0 282 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 MAN1C1Q9NR34 630 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 ZDHHC7Q9NXF8 308 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 GDAP2Q9NXN4 497 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 FBXL5Q9UKA1 691 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 MAFFQ9ULX9 164 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 NUB1Q9Y5A7 615 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 SCN1AP35498 2009 aa8.92□□□□□ -0.98
NEK3-209ENST00000618856 ARHGEF37A1IGU5 675 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 WDR27A2RRH5 827 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 H7C4K7 107 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 CALUO43852 315 aaPredicted RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 PRPF40AO75400 957 aaKnown RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 ZMYND10O75800 440 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 SMC2O95347 1197 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 VNN2O95498 520 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 NR3C1P04150 777 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 ITGB3P05106 788 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 MCM4P33991 863 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 OR1D2P34982 312 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 PNPLA4P41247 253 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 TAF6P49848 677 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 CYP2J2P51589 502 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 TFAMQ00059 246 aaKnown RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 ROR1Q01973 937 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 MORC3Q14149 939 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 CLUL1Q15846 466 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 UVSSAQ2YD98 709 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 EDRF1Q3B7T1 1238 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 C1orf220Q5T0J3 134 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 CEP57Q86XR8 500 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 PALB2Q86YC2 1186 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 ADSSL1Q8N142 457 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 C12orf76Q8N812 135 aaPredicted RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 KREMEN2Q8NCW0 462 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 SPATA18Q8TC71 538 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 PARD3BQ8TEW8 1205 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 CCDC47Q96A33 483 aaKnown RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 SENP8Q96LD8 212 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 NECTIN4Q96NY8 510 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 CGRRF1Q99675 332 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 RTP3Q9BQQ7 232 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 PHF7Q9BWX1 381 aaPredicted RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 VRTNQ9H8Y1 702 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 HOOK1Q9UJC3 728 aaKnown RBP8.91□□□□□ -0.98
NEK3-209ENST00000618856 CDY1Q9Y6F8 540 aa8.91□□□□□ -0.98
NEK3-209ENST00000618856 OR6C75A6NL08 312 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 LRRIQ3A6PVS8 624 aaPredicted RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 KPNA7A9QM74 516 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 GABRDO14764 452 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 IKBKBO14920 756 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 EXOC3O60645 756 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 KINO60870 393 aaKnown RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 AKAP3O75969 853 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms