RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SATB1Q01826 763 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 COASYQ13057 564 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 CCL14Q16627 93 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 ATPAF2Q8N5M1 289 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 PI4K2AQ9BTU6 479 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 TRMT13Q9NUP7 481 aaKnown RBP11.54□□□□□ -0.56
POLR2A-209ENST00000617998 UBA6A0AVT1 1052 aaPredicted RBP11.54□□□□□ -0.56
POLR2A-209ENST00000617998 SNX2O60749 519 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 GSDMAQ96QA5 445 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 BTBD7Q9P203 1132 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 SNCAIPQ9Y6H5 919 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 CNTNAP2Q9UHC6 1331 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 ATP5DP30049 168 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 NMT1P30419 496 aaKnown RBP11.54□□□□□ -0.56
POLR2A-209ENST00000617998 TRMT11Q7Z4G4 463 aaKnown RBP11.54□□□□□ -0.56
POLR2A-209ENST00000617998 NPAS4Q8IUM7 802 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 HEY1Q9Y5J3 304 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 C1QTNF3-AMACRE9PGA6 284 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 CSH1P0DML2 217 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 CSH2P0DML3 217 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 ARP10275 920 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 KPNA2P52292 529 aaKnown RBP11.54□□□□□ -0.56
POLR2A-209ENST00000617998 ENOSF1Q7L5Y1 443 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 BAG1Q99933 345 aaPredicted RBP11.54□□□□□ -0.56
POLR2A-209ENST00000617998 TUBGCP2Q9BSJ2 902 aa11.54□□□□□ -0.56
POLR2A-209ENST00000617998 ENDOD1O94919 500 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 AMD1P17707 334 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 EIF4BP23588 611 aaKnown RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 GEMIN4P57678 1058 aaKnown RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PTK7Q13308 1070 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 GPR158Q5T848 1215 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 SLC32A1Q9H598 525 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 COG4Q9H9E3 785 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 HSPBP1Q9NZL4 362 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 LRRC63Q05C16 580 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 TFDP2Q14188 446 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 GOLGA7BQ2TAP0 167 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 DCAF6Q58WW2 860 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 DRC3Q9H069 523 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 IRF2BPLQ9H1B7 796 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 TRIM66O15016 1216 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 TSPAN3O60637 253 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 UBA1P22314 1058 aaKnown RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 RBBP5Q15291 538 aaKnown RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 ZNF771Q7L3S4 317 aaPredicted RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PHF20Q9BVI0 1012 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 NKIRAS1Q9NYS0 192 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 TLK1Q9UKI8 766 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PXDNQ92626 1479 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 USP4Q13107 963 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 MDH1BQ5I0G3 518 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 ZNF658Q5TYW1 1059 aaPredicted RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 UBLCP1Q8WVY7 318 aaPredicted RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 TTPALQ9BTX7 342 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PCSK1NQ9UHG2 260 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 STK36Q9NRP7 1315 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PDZK1P1A8MUH7 402 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.53□□□□□ -0.56
POLR2A-209ENST00000617998 NFATC1O95644 943 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 PHEXP78562 749 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 EFHC1Q5JVL4 640 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 ZSCAN1Q8NBB4 408 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 CFAP61Q8NHU2 1237 aa11.53□□□□□ -0.56
POLR2A-209ENST00000617998 EXTL3O43909 919 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 FBXO47Q5MNV8 452 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 FBXL19Q6PCT2 694 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 ATP11CQ8NB49 1132 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 DBF4BQ8NFT6 615 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 SNX21Q969T3 373 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 TMA16Q96EY4 203 aaKnown RBP11.52□□□□□ -0.56
POLR2A-209ENST00000617998 KRT82Q9NSB4 513 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 USP17L7P0C7H9 530 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 BASP1P80723 227 aaKnown RBP11.52□□□□□ -0.56
POLR2A-209ENST00000617998 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 P3H4Q92791 437 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 ULK4Q96C45 1275 aa11.52□□□□□ -0.56
POLR2A-209ENST00000617998 HEMK1Q9Y5R4 338 aaPredicted RBP11.52□□□□□ -0.56
POLR2A-209ENST00000617998 NNTQ13423 1086 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 CCINQ13939 588 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 TEKT4Q8WW24 435 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 TIGD1Q96MW7 591 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 SYT15Q9BQS2 421 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 DNAJC12Q9UKB3 198 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
POLR2A-209ENST00000617998 ZMYM2Q9UBW7 1377 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 CICQ96RK0 1608 aaPredicted RBP11.52□□□□□ -0.57
POLR2A-209ENST00000617998 KRT15P19012 456 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.57
POLR2A-209ENST00000617998 PPTC7Q8NI37 304 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 EXT2Q93063 718 aa11.52□□□□□ -0.57
POLR2A-209ENST00000617998 GPN3Q9UHW5 284 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms