RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 VPS50Q96JG6 964 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 CGREF1Q99674 301 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 FAF1Q9UNN5 650 aaPredicted RBP12.22□□□□□ -0.45
TP53-222ENST00000617185 TRAF3IP3Q9Y228 551 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 ACTL7BQ9Y614 415 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 A0A0A6YYK5 440 aaPredicted RBP12.22□□□□□ -0.45
TP53-222ENST00000617185 ARHGAP10A1A4S6 786 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 SH3PXD2BA1X283 911 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.22□□□□□ -0.45
TP53-222ENST00000617185 H0YIN7 160 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 FBP2O00757 339 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 PHF2O75151 1096 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 S100A1P23297 94 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 EPS15P42566 896 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 NPEPPSP55786 919 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 ASIC1P78348 528 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 PPIDQ08752 370 aaKnown RBP12.22□□□□□ -0.45
TP53-222ENST00000617185 NONOQ15233 471 aaKnown RBP eCLIP12.22□□□□□ -0.45
TP53-222ENST00000617185 MTDHQ86UE4 582 aaKnown RBP12.22□□□□□ -0.45
TP53-222ENST00000617185 RASSF3Q86WH2 238 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 OR6Y1Q8NGX8 325 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 PRPF31Q8WWY3 499 aaKnown RBP12.22□□□□□ -0.45
TP53-222ENST00000617185 ATP6V0A1Q93050 837 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 DMTF1Q9Y222 760 aa12.22□□□□□ -0.45
TP53-222ENST00000617185 CLRN2A0PK11 232 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 AP1G1O43747 822 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 PGM3O95394 542 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 LDHAP00338 332 aaKnown RBP12.21□□□□□ -0.45
TP53-222ENST00000617185 KRT13P13646 458 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 PLCG1P19174 1290 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 CLCN2P51788 898 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 ARPC4P59998 168 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 TBL3Q12788 808 aaKnown RBP12.21□□□□□ -0.45
TP53-222ENST00000617185 KYNUQ16719 465 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 ZNF568Q3ZCX4 644 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 SMUG1Q53HV7 270 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 SH3BP5LQ7L8J4 393 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 CCDC25Q86WR0 208 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
TP53-222ENST00000617185 ZNF398Q8TD17 642 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 PLEKHO2Q8TD55 490 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 C7orf43Q8WVR3 580 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 ITPKCQ96DU7 683 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 PTCD3Q96EY7 689 aaKnown RBP12.21□□□□□ -0.45
TP53-222ENST00000617185 NSL1Q96IY1 281 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 LSM14BQ9BX40 385 aaKnown RBP12.21□□□□□ -0.45
TP53-222ENST00000617185 TRIM9Q9C026 710 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 ERVK-5Q9HDB9 667 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 NR2E3Q9Y5X4 410 aa12.21□□□□□ -0.45
TP53-222ENST00000617185 FAM47DPA6NHR8 397 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L15C9J2P7 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L13C9JLJ4 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L11C9JVI0 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L18D6R9N7 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L22D6RA61 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L17D6RBQ6 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L19D6RCP7 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L20D6RJB6 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 ACSL3O95573 720 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 UQCRBP14927 111 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 MUTP22033 750 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 COPB2P35606 906 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 PTGIRP43119 386 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 TMED10P49755 219 aaKnown RBP12.21□□□□□ -0.46
TP53-222ENST00000617185 CHN2P52757 468 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L24Q0WX57 530 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 LPIN1Q14693 890 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 NEPROQ6NW34 567 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 EPM2AIP1Q7L775 607 aaPredicted RBP12.21□□□□□ -0.46
TP53-222ENST00000617185 ADAT2Q7Z6V5 191 aaKnown RBP12.21□□□□□ -0.46
TP53-222ENST00000617185 SFR1Q86XK3 245 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 SRRM1Q8IYB3 904 aaKnown RBP12.21□□□□□ -0.46
TP53-222ENST00000617185 CDC42EP4Q9H3Q1 356 aaKnown RBP12.21□□□□□ -0.46
TP53-222ENST00000617185 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 SLCO1B3Q9NPD5 702 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 SH3GLB2Q9NR46 395 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 NAGPAQ9UK23 515 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 ATP8B3O60423 1300 aa12.21□□□□□ -0.46
TP53-222ENST00000617185 FOXO6A8MYZ6 492 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 PLSCR1O15162 318 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 STK10O94804 968 aaKnown RBP12.2□□□□□ -0.46
TP53-222ENST00000617185 HAUS5O94927 633 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 COL6A2P12110 1019 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 CHRNA3P32297 505 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 WDR4P57081 412 aaKnown RBP12.2□□□□□ -0.46
TP53-222ENST00000617185 JAG1P78504 1218 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 EXOC3L4Q17RC7 722 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 TMEM266Q2M3C6 531 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 SYCP2LQ5T4T6 812 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 C6orf163Q5TEZ5 329 aa12.2□□□□□ -0.46
TP53-222ENST00000617185 ALKBH5Q6P6C2 394 aaKnown RBP12.2□□□□□ -0.46
TP53-222ENST00000617185 NEK8Q86SG6 692 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms