RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 TOP6BLQ8N6T0 577 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 SHC3Q92529 594 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 PANX2Q96RD6 677 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 YME1L1Q96TA2 773 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 BCO2Q9BYV7 579 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 RC3H2Q9HBD1 1191 aaKnown RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 DSEQ9UL01 958 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 NUB1Q9Y5A7 615 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 BZW2Q9Y6E2 419 aaKnown RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 HUS1O60921 280 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 TACC1O75410 805 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 B3GAT3O94766 335 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 DDHD2O94830 711 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 CLSTN1O94985 981 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
TARDBP-217ENST00000616545 LAG3P18627 525 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 MAGEA10P43363 369 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-217ENST00000616545 ALDH7A1P49419 539 aaKnown RBP12.49□□□□□ -0.41
TARDBP-217ENST00000616545 CLCNKBP51801 687 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 EPHB4P54760 987 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 JAM2P57087 298 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 BPIFB4P59827 614 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 LRMPQ12912 555 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 DRAP1Q14919 205 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-217ENST00000616545 IQCEQ6IPM2 695 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 PDXDC1Q6P996 788 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 RRAGAQ7L523 313 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 CCDC112Q8NEF3 446 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 BAP1Q92560 729 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 TATDN2Q93075 761 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 DNAJC7Q99615 494 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 RAD9AQ99638 391 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
TARDBP-217ENST00000616545 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 CNTN6Q9UQ52 1028 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 FAN1Q9Y2M0 1017 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 RWDD3Q9Y3V2 267 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 BRCA2P51587 3418 aa12.49□□□□□ -0.41
TARDBP-217ENST00000616545 CASTOR2A6NHX0 329 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 F8VZ95 297 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 EPHB6O15197 1021 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
TARDBP-217ENST00000616545 FERP16591 822 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 ANXA13P27216 316 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 BMP8BP34820 402 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 SOX5P35711 763 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 ASPAP45381 313 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
TARDBP-217ENST00000616545 CDK17Q00537 523 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 BTG3Q14201 252 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-217ENST00000616545 SFMBT2Q5VUG0 894 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 UNC93AQ86WB7 457 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 ZNF280BQ86YH2 543 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 HERC6Q8IVU3 1022 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 ARHGEF19Q8IW93 802 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 APPL2Q8NEU8 664 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 SUSD3Q96L08 255 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 GOLGA2P5Q9HBQ8 144 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 NLRC4Q9NPP4 1024 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
TARDBP-217ENST00000616545 KIAA1257Q9ULG3 409 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
TARDBP-217ENST00000616545 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
TARDBP-217ENST00000616545 M0QZQ0 153 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 NRP1O14786 923 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 SYN3O14994 580 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 LRRN2O75325 713 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 GALTP07902 379 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 ODC1P11926 461 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 TYMPP19971 482 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 PPM1AP35813 382 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 OR1G1P47890 313 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 INCA1Q0VD86 236 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 MEA1Q16626 185 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 SPOPLQ6IQ16 392 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 CCDC186Q7Z3E2 898 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 METTL23Q86XA0 190 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 FAM71AQ8IYT1 594 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 FIBCD1Q8N539 461 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 TC2NQ8N9U0 490 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-217ENST00000616545 FAM84AQ96KN4 292 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 RNPC3Q96LT9 517 aaKnown RBP12.47□□□□□ -0.41
TARDBP-217ENST00000616545 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
TARDBP-217ENST00000616545 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms