RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ADGRF2Q8IZF7 708 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 UBA3Q8TBC4 463 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ZNF507Q8TCN5 953 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 CHP1Q99653 195 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 GOLGA8QA0A0J9YX86 632 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 GOLGA8OA6NCC3 632 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 GOLGA8NF8WBI6 632 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 FZD9O00144 591 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 NCK2O43639 380 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 GPC4O75487 556 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 PSMD10O75832 226 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 AMHP03971 560 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 HMBSP08397 361 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 GNGT1P63211 74 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ST3GAL1Q11201 340 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 DRP2Q13474 957 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ANO4Q32M45 955 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 MCUQ8NE86 351 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ASB7Q9H672 318 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 INTS9Q9NV88 658 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 LTBP3Q9NS15 1303 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 AP1G2O75843 785 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SLURP2P0DP57 97 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 HARS2P49590 506 aaKnown RBP9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 RASSF2P50749 326 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 TPD52P55327 224 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SLC7A5Q01650 507 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 CTXN3Q4LDR2 81 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 NT5DC4Q86YG4 428 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SLC7A14Q8TBB6 771 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SEMA6BQ9H3T3 888 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ENTPD7Q9NQZ7 604 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 BTBD19C9JJ37 291 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SLC2A3P11169 496 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SOX10P56693 466 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 KRT33BQ14525 404 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 NFE2Q16621 373 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ALS2CLQ60I27 953 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SPOPLQ6IQ16 392 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 PLPPR4Q7Z2D5 763 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 PID1Q7Z2X4 250 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 CATSPERBQ9H7T0 1116 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 INTUQ9ULD6 942 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 TACC3Q9Y6A5 838 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 AP3B1O00203 1094 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 KRT14P02533 472 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CASP4P49662 377 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 ATP1A2P50993 1020 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 EIF3EP60228 445 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 DCAF6Q58WW2 860 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 MYLK4Q86YV6 388 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CCDC60Q8IWA6 550 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 SCG3Q8WXD2 468 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 SNTG2Q9NY99 539 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 BCAP29Q9UHQ4 241 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 LOC102724159A0A0B4J2E5 919 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CCDC160A6NGH7 325 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 SPATA31C2B4DYI2 1134 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 EEF2KO00418 725 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 HGSO14964 777 aaPredicted RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CXCL8P10145 99 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PON1P27169 355 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PTGER2P43116 358 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 ADCY2Q08462 1091 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PWP2Q15269 919 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 FBXO47Q5MNV8 452 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 C10orf120Q5SQS8 335 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 LBX2Q6XYB7 198 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PARD6BQ9BYG5 372 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 RABEP2Q9H5N1 569 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 NR2E3Q9Y5X4 410 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 TBKBP1A7MCY6 615 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PSMD3O43242 534 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 KRT38O76015 456 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 SNHG28P0DPA3 235 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CD44P16070 742 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 GPS1Q13098 491 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 DHX34Q14147 1143 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CYP4A22Q5TCH4 519 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CXCL17Q6UXB2 119 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 FEZF2Q8TBJ5 459 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 ASAP3Q8TDY4 903 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 ZMYM2Q9UBW7 1377 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 GTPBP10A4D1E9 387 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 ARHGAP25P42331 645 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 BCAT1P54687 386 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 PCBP1Q15365 356 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 C6orf118Q5T5N4 469 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CCDC137Q6PK04 289 aaKnown RBP9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 ATPAF2Q8N5M1 289 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 COPS5Q92905 334 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CAPNS2Q96L46 248 aa9.94□□□□□ -0.82
CLTCL1-208ENST00000615606 CAPS2Q9BXY5 557 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms