RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ZMAT2Q96NC0 199 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 TWNKQ96RR1 684 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 HEMGNQ9BXL5 484 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 GCOM2Q9BZD3 368 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 SDCBP2Q9H190 292 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 PCDH10Q9P2E7 1040 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 AMACRQ9UHK6 382 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 NOC2LQ9Y3T9 749 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 KAT6AQ92794 2004 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TMEM88BA6NKF7 163 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 KIAA0391O15091 583 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 RAD51CO43502 376 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 HEXIM1O94992 359 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 F2P00734 622 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 CCND3P30281 292 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 HOXA11P31270 313 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 ABCD1P33897 745 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 CARSP49589 748 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 AFF1P51825 1210 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 RPL7AP62424 266 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 TMEM132DQ14C87 1099 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ZNF667Q5HYK9 610 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 BEND6Q5SZJ8 279 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 MCOLN2Q8IZK6 566 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 USP38Q8NB14 1042 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 RIN2Q8WYP3 895 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 WNT8BQ93098 351 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 EMID1Q96A84 441 aaPredicted RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 HPDLQ96IR7 371 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 HEXIM2Q96MH2 286 aaKnown RBP3.67□□□□□ -1.82
LIG4-205ENST00000614526 APBA2Q99767 749 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 SELENOOQ9BVL4 669 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 NIF3L1Q9GZT8 377 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 XYLT2Q9H1B5 865 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 DPH5Q9H2P9 285 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 RNF186Q9NXI6 227 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TUBGCP4Q9UGJ1 667 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 NFU1Q9UMS0 254 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 SNX9Q9Y5X1 595 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 TLL2Q9Y6L7 1015 aa3.67□□□□□ -1.82
LIG4-205ENST00000614526 ARID2Q68CP9 1835 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 LAMA3Q16787 3333 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 A0A1B0GUA9 196 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 C17orf102A2RUQ5 167 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 CCDC151A5D8V7 595 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PI4K2BG5E9Z4 385 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PMM2O15305 246 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 DDX3YO15523 660 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 CA12O43570 354 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 GPR32O75388 356 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PDGFRBP09619 1106 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 RARBP10826 455 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PYGMP11217 842 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 UNGP13051 313 aaPredicted RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 TCF4P15884 667 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PRLRP16471 622 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 EIF4BP23588 611 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 PLA2G4AP47712 749 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 KCNJ1P48048 391 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 CPT1AP50416 773 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 SREBF2Q12772 1141 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 SNX1Q13596 522 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 HLTFQ14527 1009 aaKnown RBP eCLIP3.66□□□□□ -1.82
LIG4-205ENST00000614526 NBPF20Q3BBV1 942 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 TWF2Q6IBS0 349 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 CCDC70Q6NSX1 233 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 SND1Q7KZF4 910 aaKnown RBP eCLIP3.66□□□□□ -1.82
LIG4-205ENST00000614526 ENOSF1Q7L5Y1 443 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 MTERF4Q7Z6M4 381 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 RHOT2Q8IXI1 618 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 SYCE1Q8N0S2 351 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 LINC01465Q8N7H1 131 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 MSANTD4Q8NCY6 345 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 LPPQ93052 612 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 CCDC102AQ96A19 550 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 RNPC3Q96LT9 517 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 ZFP42Q96MM3 310 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 FUT8Q9BYC5 575 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 ADAMTS10Q9H324 1103 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 ERVK-5Q9HDB9 667 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 FAM49BQ9NUQ9 324 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 DPP3Q9NY33 737 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 STXBP5LQ9Y2K9 1186 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PTPN22Q9Y2R2 807 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 LOXHD1Q8IVV2 1947 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 NRCAMQ92823 1304 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 TRIP12Q14669 1992 aaPredicted RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 PLXNB2O15031 1838 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 A0A0A6YYK5 440 aaPredicted RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 LOC102724159A0A0B4J2E5 919 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 RRN3P2A6NIE6 340 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 MYO1FO00160 1098 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 PGRMC1O00264 195 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 KIF3CO14782 793 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 TLR3O15455 904 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 TTI1O43156 1089 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 SART1O43290 800 aaKnown RBP3.66□□□□□ -1.82
LIG4-205ENST00000614526 B4GALT4O60513 344 aa3.66□□□□□ -1.82
LIG4-205ENST00000614526 ZC3H11AO75152 810 aaKnown RBP eCLIP3.66□□□□□ -1.82
LIG4-205ENST00000614526 ERLIN1O75477 346 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms