RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 SOX4Q06945 474 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 MYO1EQ12965 1108 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TRPC3Q13507 836 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 IQCEQ6IPM2 695 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 PDXDC1Q6P996 788 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 DCLRE1AQ6PJP8 1040 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TMC6Q7Z403 805 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 PPFIBP1Q86W92 1011 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TOP6BLQ8N6T0 577 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 CCDC112Q8NEF3 446 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 NCAPGQ9BPX3 1015 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 APOBEC3GQ9HC16 384 aaKnown RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TBC1D13Q9NVG8 400 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 MIOSQ9NXC5 875 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TUBGCP4Q9UGJ1 667 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 MEIS3P2A8K0S8 358 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 AKR1B15C9JRZ8 316 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 M0QZQ0 153 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 PHACTR2O75167 634 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 CYP11A1P05108 521 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TYMPP19971 482 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 ACO1P21399 889 aaKnown RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 BMP8BP34820 402 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 TAF6P49848 677 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 SCNN1GP51170 649 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 BIRC3Q13489 604 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 CUL2Q13617 745 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 UPP1Q16831 310 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 ZNF699Q32M78 642 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 PHLDB3Q6NSJ2 640 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 CD300LGQ6UXG3 332 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 DEFB128Q7Z7B8 93 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 FAM71AQ8IYT1 594 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 ZNF397Q8NF99 534 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 LPPQ93052 612 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 C18orf25Q96B23 403 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 OXCT2Q9BYC2 517 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-210ENST00000614398 GPR88Q9GZN0 384 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 PLAGL2Q9UPG8 496 aa6.7□□□□□ -1.34
CBWD3-210ENST00000614398 F8VZ95 297 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 PODXLO00592 558 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 EPHB6O15197 1021 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ITGB3P05106 788 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 CCDC172P0C7W6 258 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 FERP16591 822 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 WARSP23381 471 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 POLR2BP30876 1174 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ASPAP45381 313 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 MYL6P60660 151 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 SATB1Q01826 763 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ZNF667Q5HYK9 610 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 UNC93AQ86WB7 457 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ARHGEF19Q8IW93 802 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 RNF168Q8IYW5 571 aaPredicted RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 TMEM86AQ8N2M4 240 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 TC2NQ8N9U0 490 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 OR8K1Q8NGG5 319 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 HPDLQ96IR7 371 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ZFP42Q96MM3 310 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 KREMEN1Q96MU8 473 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 LBHD1Q9BQE6 289 aaPredicted RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 APOL6Q9BWW8 343 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 CXCL16Q9H2A7 254 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 MMRN2Q9H8L6 949 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 KLK14Q9P0G3 267 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 DNAJC12Q9UKB3 198 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 DSEQ9UL01 958 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 AGAP1Q9UPQ3 857 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 LUC7L2Q9Y383 392 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 NUB1Q9Y5A7 615 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 FHOD1Q9Y613 1164 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 BZW2Q9Y6E2 419 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 SCN1AP35498 2009 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 NLRC5Q86WI3 1866 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 SSU72P8A0A1W2PR75 194 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 PES1O00541 588 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 CST3P01034 146 aaPredicted RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 PAEPP09466 180 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 TRIM21P19474 475 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 SOX5P35711 763 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 STAT1P42224 750 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 KLK7P49862 253 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 FXR1P51114 621 aaKnown RBP eCLIP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 EPHB4P54760 987 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 BPIFB4P59827 614 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ELAVL2Q12926 359 aaKnown RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 LMBRD2Q68DH5 695 aaPredicted RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ZNF365Q70YC5 407 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ZNF677Q86XU0 584 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 FAM212AQ96EL1 285 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 SUSD3Q96L08 255 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 SYT11Q9BT88 431 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 DNAI2Q9GZS0 605 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 CWH43Q9H720 699 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 ABHD10Q9NUJ1 306 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 FEZ2Q9UHY8 353 aaPredicted RBP6.69□□□□□ -1.34
CBWD3-210ENST00000614398 KIAA1257Q9ULG3 409 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 PCDHB8Q9UN66 801 aa6.69□□□□□ -1.34
CBWD3-210ENST00000614398 RWDD3Q9Y3V2 267 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms