RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 FAM184BQ9ULE4 1060 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 MKL2Q9ULH7 1088 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 GUCA1BQ9UMX6 200 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 TRAF3IP3Q9Y228 551 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 PCDHB2Q9Y5E7 798 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 PCDHA13Q9Y5I0 950 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 COL4A3BPQ9Y5P4 624 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 FADS3Q9Y5Q0 445 aa7.12□□□□□ -1.27
CDKAL1-204ENST00000613575 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 QSER1Q2KHR3 1735 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 H0YC42 278 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 EPHB6O15197 1021 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 PLA2G6O60733 806 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 SNX2O60749 519 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 NOL4O94818 638 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 EIF2S1P05198 315 aaKnown RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 SPATA31C1P0DKV0 1188 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 IDEP14735 1019 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 PORP16435 677 aaPredicted RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 FUT4P22083 530 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 USP14P54578 494 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 TPD52P55327 224 aaPredicted RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 PLOD1Q02809 727 aaPredicted RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 PTSQ03393 145 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 ADAM9Q13443 819 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 SPA17Q15506 151 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 TAF11Q15544 211 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 HGSNATQ68CP4 663 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 DPY19L2P1Q6NXN4 242 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 C3orf62Q6ZUJ4 267 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 EPM2AIP1Q7L775 607 aaPredicted RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 KRT77Q7Z794 578 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 DEFB132Q7Z7B7 95 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 CATSPER3Q86XQ3 398 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 LSMEM2Q8N112 164 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 STKLD1Q8NE28 680 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 TNIP2Q8NFZ5 429 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 FRS2Q8WU20 508 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 PNKPQ96T60 521 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 HNRNPABQ99729 332 aaKnown RBP7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 UQCC2Q9BRT2 126 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 CCDC28BQ9BUN5 200 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 DEFB129Q9H1M3 183 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 AIPL1Q9NZN9 384 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 GABBR1Q9UBS5 961 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 TRIM10Q9UDY6 481 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 HPCAL4Q9UM19 191 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 NRXN2Q9P2S2 1712 aa7.11□□□□□ -1.27
CDKAL1-204ENST00000613575 SERTM1A2A2V5 107 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 TMEM88BA6NKF7 163 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 E9PMD0 336 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 H0YIN7 160 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 MED24O75448 989 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 NDUFB10O96000 172 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 ATP1A1P05023 1023 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 ALDH2P05091 517 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 CYP1A2P05177 515 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 BMP3P12645 472 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 MUTP22033 750 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 PSMA6P60900 246 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 CKAP4Q07065 602 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 GIT2Q14161 759 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 LRRC41Q15345 812 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 SLC15A2Q16348 729 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 NDUFA5Q16718 116 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 BMT2Q1RMZ1 405 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 ABCB5Q2M3G0 1257 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 PDCD4Q53EL6 469 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 ANKRD20A8PQ5CZ79 823 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 NAA35Q5VZE5 725 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 HAUS3Q68CZ6 603 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 PDXDC1Q6P996 788 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 C6orf89Q6UWU4 347 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 FRMD5Q7Z6J6 570 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 FBXO11Q86XK2 927 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 C2CD5Q86YS7 1000 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 MMGT1Q8N4V1 131 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 PAF1Q8N7H5 531 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 LINC00469Q8N7U9 141 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 GLIS3Q8NEA6 775 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 ZNF473Q8WTR7 871 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 NCSTNQ92542 709 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 RUBCNQ92622 972 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 ERP27Q96DN0 273 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 EEF2KMTQ96G04 330 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 GAS2L1Q99501 681 aaPredicted RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 HSD17B14Q9BPX1 270 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 NSRP1Q9H0G5 558 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 DBNDD1Q9H9R9 158 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 INIPQ9NRY2 104 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 CEP72Q9P209 647 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 HERC5Q9UII4 1024 aaKnown RBP7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 DNM3Q9UQ16 869 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 USTQ9Y2C2 406 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 DUSP10Q9Y6W6 482 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 COMMD3-BMI1R4GMX3 469 aa7.1□□□□□ -1.27
CDKAL1-204ENST00000613575 E7ENQ6 273 aa7.09□□□□□ -1.27
CDKAL1-204ENST00000613575 TRAF5O00463 557 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms