RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 AGBL2Q5U5Z8 902 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 SPOPLQ6IQ16 392 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 CRELD2Q6UXH1 353 aaPredicted RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 TRPM8Q7Z2W7 1104 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 LRRC71Q8N4P6 559 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 P3H4Q92791 437 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 MSTO1Q9BUK6 570 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 IGF2BP3O00425 579 aaKnown RBP eCLIP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 TTI1O43156 1089 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 SNUPNO95149 360 aaKnown RBP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 SLC25A27O95847 323 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 SRGAP2CP0DJJ0 459 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 TGFB3P10600 412 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 FMO1Q01740 532 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 ADAT2Q7Z6V5 191 aaKnown RBP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 VTI1AQ96AJ9 217 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 PRMT1Q99873 361 aaKnown RBP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 RBAKQ9NYW8 714 aaPredicted RBP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 SAMD15Q9P1V8 674 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 PGRMC1O00264 195 aaKnown RBP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 GTF2H1P32780 548 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 GJA5P36382 358 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
CNOT3-208ENST00000613073 CUL1Q13616 776 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 TMC3Q7Z5M5 1100 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 ACTRT1Q8TDG2 376 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 SLC5A4Q9NY91 659 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 CENPFP49454 3210 aa17.54■□□□□ 0.4
CNOT3-208ENST00000613073 LINGO3P0C6S8 592 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 ABL2P42684 1182 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 PDE6CP51160 858 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 MCCD1P59942 119 aaPredicted RBP17.53■□□□□ 0.4
CNOT3-208ENST00000613073 GPC5P78333 572 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 ZNF211Q13398 564 aaPredicted RBP17.53■□□□□ 0.4
CNOT3-208ENST00000613073 TDRD10Q5VZ19 366 aaKnown RBP17.53■□□□□ 0.4
CNOT3-208ENST00000613073 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
CNOT3-208ENST00000613073 TRAPPC12Q8WVT3 735 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 ZNF317Q96PQ6 595 aaPredicted RBP17.53■□□□□ 0.4
CNOT3-208ENST00000613073 PLCD4Q9BRC7 762 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.53■□□□□ 0.43e-7■■■■□ 22.3
CNOT3-208ENST00000613073 IRAK4Q9NWZ3 460 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 TRIM33Q9UPN9 1127 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 KRIT1O00522 736 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 CES2O00748 559 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 NQO1P15559 274 aaKnown RBP17.53■□□□□ 0.4
CNOT3-208ENST00000613073 OSBPP22059 807 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 RFC5P40937 340 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 SCARA3Q6AZY7 606 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 GPAT2Q6NUI2 795 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 ZBTB33Q86T24 672 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 BTBD6Q96KE9 485 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 SPATA33Q96N06 139 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 GPR20Q99678 358 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 TRIM51Q9BSJ1 452 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 TMEM59LQ9UK28 342 aa17.53■□□□□ 0.4
CNOT3-208ENST00000613073 PIK3CAP42336 1068 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 PSMD6Q15008 389 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 DCAF12L1Q5VU92 463 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 TCHPQ9BT92 498 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 ECT2Q9H8V3 914 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 ALG6Q9Y672 507 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 DDX3YO15523 660 aaKnown RBP17.52■□□□□ 0.4
CNOT3-208ENST00000613073 MAFO75444 373 aaPredicted RBP17.52■□□□□ 0.4
CNOT3-208ENST00000613073 HLA-DRAP01903 254 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 FGGP02679 453 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 GJB1P08034 283 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 KRT16P08779 473 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 RWDD2BP57060 319 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 MESDQ14696 234 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 CELF3Q5SZQ8 465 aaKnown RBP17.52■□□□□ 0.4
CNOT3-208ENST00000613073 FASTKD5Q7L8L6 764 aaKnown RBP17.52■□□□□ 0.4
CNOT3-208ENST00000613073 RHOT2Q8IXI1 618 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 SCFD2Q8WU76 684 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 KIAA1586Q9HCI6 787 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 STYXL1Q9Y6J8 313 aa17.52■□□□□ 0.4
CNOT3-208ENST00000613073 ADCY3O60266 1144 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 SLCO1A2P46721 670 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 NCALDP61601 193 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ANKRD20A2Q5SQ80 823 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ANKRD20A1Q5TYW2 823 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ANKRD20A3Q5VUR7 823 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 AADACL2Q6P093 401 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 C15orf39Q6ZRI6 1047 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 TAX1BP1Q86VP1 789 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 KLHL29Q96CT2 875 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 OSBPL1AQ9BXW6 950 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 ZCWPW1Q9H0M4 648 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 A0A0B4J269 797 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 C4BPAP04003 597 aaKnown RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 SSTR3P32745 418 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 COPB2P35606 906 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 TNFSF9P41273 254 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 IFI35P80217 286 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 CDR2Q01850 454 aa17.51■□□□□ 0.39
CNOT3-208ENST00000613073 MKRN4PQ13434 485 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-208ENST00000613073 MTMR3Q13615 1198 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms