RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PDCD6IPQ8WUM4 868 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 HAS1Q92839 578 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ABI2Q9NYB9 513 aaPredicted RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 HEY1Q9Y5J3 304 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 CHD4Q14839 1912 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ANO9A1A5B4 782 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 KLRG2A4D1S0 409 aaPredicted RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 MAFGO15525 162 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 LGALS2P05162 132 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ACAT1P24752 427 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 USP4Q13107 963 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 UGCGQ16739 394 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 TSNAXIP1Q2TAA8 658 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 PAPD7Q5XG87 772 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF449Q6P9G9 518 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 TTC30BQ8N4P2 665 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 REPS2Q8NFH8 660 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 URGCPQ8TCY9 931 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 AGAP11Q8TF27 550 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ECT2Q9H8V3 914 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 SNTG2Q9NY99 539 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 REXO2Q9Y3B8 237 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 LRP5O75197 1615 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 TBX3O15119 743 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 MAGEB2O15479 319 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 CREB3O43889 395 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 PFDN1O60925 122 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 LUC7L3O95232 432 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 PLTPP55058 493 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ELF3P78545 371 aaPredicted RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 ZBED6P86452 979 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 MAP2K5Q13163 448 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 TMEM132DQ14C87 1099 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 CCDC89Q8N998 374 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 SYT2Q8N9I0 419 aaPredicted RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 KIAA0895Q8NCT3 520 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 GBP5Q96PP8 586 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 SPON2Q9BUD6 331 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 INTS2Q9H0H0 1204 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 RNPEPQ9H4A4 650 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 KBTBD4Q9NVX7 518 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 RBPJLQ9UBG7 517 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 AFG3L2Q9Y4W6 797 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 NID2Q14112 1375 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 FKTNO75072 461 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 IGFBP4P22692 258 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 GNA15P30679 374 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 EFNA5P52803 228 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 LAMTOR4Q0VGL1 99 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 FSTL1Q12841 308 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 GIT2Q14161 759 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 MSL3Q8N5Y2 521 aaKnown RBP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 CCDC26Q8TAB7 109 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 TEKT4Q8WW24 435 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 LPPQ93052 612 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 GMLQ99445 158 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 VCXQ9H320 206 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 CNOT8Q9UFF9 292 aaKnown RBP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 INTUQ9ULD6 942 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 C15orf41Q9Y2V0 281 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 A6NJR5 290 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 CCT8L1PA6NM43 557 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 FERP16591 822 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 GRK4P32298 578 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 PAPOLAP51003 745 aaKnown RBP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 RAD23BP54727 409 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 ADCY2Q08462 1091 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 TSTA3Q13630 321 aaPredicted RBP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 C3orf20Q8ND61 904 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.57
FAM3A-221ENST00000612856 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 TRIM7Q9C029 511 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 THAP9Q9H5L6 903 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 BLOC1S4Q9NUP1 217 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 TBX20Q9UMR3 447 aa11.46□□□□□ -0.57
FAM3A-221ENST00000612856 LGALS16A8MUM7 142 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 PI4K2BG5E9Z4 385 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 RASSF9O75901 435 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 MYL1P05976 194 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ATP2A2P16615 1042 aaKnown RBP11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ANXA13P27216 316 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 SMARCA1P28370 1054 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 GRIK1P39086 918 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 CASP5P51878 434 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ZNF131P52739 623 aa11.46□□□□□ -0.58
FAM3A-221ENST00000612856 ITGB3BPQ13352 177 aaPredicted RBP11.46□□□□□ -0.58
FAM3A-221ENST00000612856 HP1BP3Q5SSJ5 553 aaPredicted RBP11.46□□□□□ -0.58
FAM3A-221ENST00000612856 WHAMMQ8TF30 809 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms