RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 AVENQ9NQS1 362 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF432O94892 652 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CALB1P05937 261 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GNB3P16520 340 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GNAT2P19087 354 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ABCE1P61221 599 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MINDY4Q4G0A6 757 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 AKAP7Q9P0M2 348 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NDUFA5Q16718 116 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MBD2Q9UBB5 411 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 H0Y8G0 127 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SLC1A4P43007 532 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GALK1P51570 392 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MGAT4AQ9UM21 535 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 H0Y3Z8 333 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RASA1P20936 1047 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RESTQ13127 1097 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CLEC16AQ2KHT3 1053 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TAF1BQ53T94 588 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ANO5Q75V66 913 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 COQ8AQ8NI60 647 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRIM10Q9UDY6 481 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SMIM31A0A1B0GVY4 71 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DYNC1LI2O43237 492 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 S100A6P06703 90 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TYW3Q6IPR3 259 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LRRC31Q6UY01 552 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SECISBP2LQ93073 1101 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PHACTR1Q9C0D0 580 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 COG2Q14746 738 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HIST2H2ACQ16777 129 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BTBD8Q5XKL5 378 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KCTD16Q68DU8 428 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRPM8Q7Z2W7 1104 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TTC8Q8TAM2 541 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 REXO5Q96IC2 774 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 H2AFJQ9BTM1 129 aa11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LSM7Q9UK45 103 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DDHD1Q8NEL9 900 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DDI1Q8WTU0 396 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IL25Q9H293 177 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 OSGEPL1Q9H4B0 414 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SNX8Q9Y5X2 465 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MAST3O60307 1309 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SASH3O75995 380 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ASMTP46597 345 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SLCO1A2P46721 670 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 STK4Q13043 487 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SFMBT2Q5VUG0 894 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IL1RL2Q9HB29 575 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RCOR1Q9UKL0 485 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ANKRD65E5RJM6 399 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KPNA5O15131 536 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ESRRAP11474 423 aaPredicted RBP11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CPB1P15086 417 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CASP14P31944 242 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SKP1P63208 163 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SCGB2A2Q13296 93 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GRB14Q14449 540 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EXOC3L4Q17RC7 722 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CWF19L1Q69YN2 538 aaKnown RBP11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ACAD10Q6JQN1 1059 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EPHX4Q8IUS5 362 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ATPIF1Q9UII2 106 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PKP3Q9Y446 797 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ATP7AQ04656 1500 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SP100P23497 879 aaPredicted RBP11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 STIP1P31948 543 aaKnown RBP11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PSEN2P49810 448 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SERHLQ9NQF3 203 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DNTTP04053 509 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EPHA10Q5JZY3 1008 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GIPC3Q8TF64 312 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ANGPTL2Q9UKU9 493 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DNAL1Q4LDG9 190 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM171BQ6P995 826 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TESCQ96BS2 214 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms