RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TMEM74BQ9NUR3 256 aa5.74□□□□□ -1.49
HDDC2-207ENST00000608532 KIAA0355O15063 1070 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 ESRRBO95718 433 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 CT47B1P0C2W7 299 aaPredicted RBP5.73□□□□□ -1.49
HDDC2-207ENST00000608532 NEK2P51955 445 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 NANOS3P60323 173 aaKnown RBP5.73□□□□□ -1.49
HDDC2-207ENST00000608532 IGBP1P78318 339 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 FPGSQ05932 587 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 PREPLQ4J6C6 727 aaPredicted RBP5.73□□□□□ -1.49
HDDC2-207ENST00000608532 CCDC93Q567U6 631 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 CCDC157Q569K6 752 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 Q6ZNX1 250 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 CLNKQ7Z7G1 428 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 SH2D3CQ8N5H7 860 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 PDPRQ8NCN5 879 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 HOOK2Q96ED9 719 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 DMTF1Q9Y222 760 aa5.73□□□□□ -1.49
HDDC2-207ENST00000608532 MYADML2A6NDP7 307 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 TOR1BO14657 336 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 FTLP02792 175 aaPredicted RBP5.72□□□□□ -1.49
HDDC2-207ENST00000608532 GNAI3P08754 354 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 KCNA2P16389 499 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 MPLP40238 635 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 PHKA1P46020 1223 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 GNAI1P63096 354 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 SF3B3Q15393 1217 aaKnown RBP5.72□□□□□ -1.49
HDDC2-207ENST00000608532 ERCC6LQ2NKX8 1250 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 CD300EQ496F6 205 aaPredicted RBP5.72□□□□□ -1.49
HDDC2-207ENST00000608532 TMEM240Q5SV17 173 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 THEMIS2Q5TEJ8 643 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 USP45Q70EL2 814 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 CFAP52Q8N1V2 620 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 SSH3Q8TE77 659 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 RGMAQ96B86 450 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 BRD9Q9H8M2 597 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 VSX1Q9NZR4 365 aaPredicted RBP5.72□□□□□ -1.49
HDDC2-207ENST00000608532 POLHQ9Y253 713 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
HDDC2-207ENST00000608532 PRAMEF33A0A0G2JMD5 474 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 ZNF785A8K8V0 405 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 PRAMEF10O60809 474 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 GJB1P08034 283 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 PF4V1P10720 104 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 MRPS35P82673 323 aaKnown RBP5.71□□□□□ -1.5
HDDC2-207ENST00000608532 PIGFQ07326 219 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 STRIP1Q5VSL9 837 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 SLC30A10Q6XR72 485 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 HEATR3Q7Z4Q2 680 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 Q8NA96 180 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 TNPO1Q92973 898 aaKnown RBP5.71□□□□□ -1.5
HDDC2-207ENST00000608532 C1orf43Q9BWL3 253 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
HDDC2-207ENST00000608532 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 LRIT1Q9P2V4 623 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 ABCF2Q9UG63 623 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 MAST3O60307 1309 aa5.71□□□□□ -1.5
HDDC2-207ENST00000608532 CCDC195A0A1B0GUA6 201 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 A0A1W2PS29 197 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 ZAR1LA6NP61 321 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 NT5C1B-RDH14C9J2C7 533 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 PEX1O43933 1283 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 POU2F2P09086 479 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 CYP2C19P33261 490 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 ADRA1BP35368 520 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 FXR1P51114 621 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDDC2-207ENST00000608532 RPS7P62081 194 aaKnown RBP5.7□□□□□ -1.5
HDDC2-207ENST00000608532 MC2RQ01718 297 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 NOGQ13253 232 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 TAPT1Q6NXT6 567 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 FBXO41Q8TF61 875 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 FUBP1Q96AE4 644 aaKnown RBP5.7□□□□□ -1.5
HDDC2-207ENST00000608532 SMOQ99835 787 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 GTPBP4Q9BZE4 634 aaKnown RBP5.7□□□□□ -1.5
HDDC2-207ENST00000608532 SYNPO2LQ9H987 977 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 KIAA1586Q9HCI6 787 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 LMBRD1Q9NUN5 540 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
HDDC2-207ENST00000608532 CTTNBP2NLQ9P2B4 639 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 CFAP97Q9P2B7 532 aa5.7□□□□□ -1.5
HDDC2-207ENST00000608532 FEZ2Q9UHY8 353 aaPredicted RBP5.7□□□□□ -1.5
HDDC2-207ENST00000608532 E9PLN8 166 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
HDDC2-207ENST00000608532 ALDH1L1O75891 902 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 ARIH2O95376 493 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 ANXA1P04083 346 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 GATA3P23771 443 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 PRDX5P30044 214 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 PIK3CGP48736 1102 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 MAP2K6P52564 334 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 ZNF135P52742 658 aaPredicted RBP5.69□□□□□ -1.5
HDDC2-207ENST00000608532 PGS1Q32NB8 556 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 SP5Q6BEB4 398 aaPredicted RBP5.69□□□□□ -1.5
HDDC2-207ENST00000608532 TSHZ1Q6ZSZ6 1077 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 GRAMD1CQ8IYS0 662 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 ADGRG5Q8IZF4 528 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 PRR18Q8N4B5 295 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 TOR1AIP2Q8NFQ8 470 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 SLC30A5Q8TAD4 765 aa5.69□□□□□ -1.5
HDDC2-207ENST00000608532 ACTRT2Q8TDY3 377 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms