RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, human

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00343-210	ENST00000608220	CRB2	Q5IJ48	1285 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	FKBP15	Q5T1M5	1219 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220		Q6ZRM9	215 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	HOMER1	Q86YM7	354 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	RASAL3	Q86YV0	1011 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	PASD1	Q8IV76	773 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	ZZZ3	Q8IYH5	903 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	NXPE1	Q8N323	547 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	SYNPO	Q8N3V7	929 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	UIMC1	Q96RL1	719 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	PLEKHF1	Q96S99	279 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	NOL10	Q9BSC4	688 aa	Known RBP	4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	SLC2A4RG	Q9NR83	387 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	THG1L	Q9NWX6	298 aa	Known RBP	4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	HYPK	Q9NX55	129 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	RNF186	Q9NXI6	227 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	CEP72	Q9P209	647 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	DBF4	Q9UBU7	674 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	HDAC9	Q9UKV0	1011 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	XDH	P47989	1333 aa		4.96	□□□□□ -1.62
LINC00343-210	ENST00000608220	MYH3	P11055	1940 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ADM5	C9JUS6	153 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	UFL1	O94874	794 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	PCDH8	O95206	1070 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	DDX58	O95786	925 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	VIL1	P09327	827 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	EIF2S2	P20042	333 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	MAK	P20794	623 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	MAN2A2	P49641	1150 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	NPEPPS	P55786	919 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ZNF280A	P59817	542 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ADAM8	P78325	824 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	RALBP1	Q15311	655 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	KIAA1841	Q6NSI8	718 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	UNQ6494/PRO21346	Q6UXR6	183 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ZNF662	Q6ZS27	426 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	COPS6	Q7L5N1	327 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	MB21D1	Q8N884	522 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	CHTF18	Q8WVB6	975 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	PGBD4	Q96DM1	585 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	CLIP3	Q96DZ5	547 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	CHFR	Q96EP1	664 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	CDCA5	Q96FF9	252 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	RNPC3	Q96LT9	517 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	CDC5L	Q99459	802 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ISCA1	Q9BUE6	129 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	GPR87	Q9BY21	358 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	PIF1	Q9H611	641 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	DBNDD1	Q9H9R9	158 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	INTS7	Q9NVH2	962 aa	Known RBP	4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	MIS18A	Q9NYP9	233 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	ECM29	Q5VYK3	1845 aa		4.95	□□□□□ -1.62
LINC00343-210	ENST00000608220	RTL9	Q8NET4	1388 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220		A0A0A6YYJ9	748 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	ZNF891	A8MT65	544 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	OVOL3	O00110	214 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	OPHN1	O60890	802 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	MFAP3L	O75121	409 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	FSBP	O95073	299 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	F2	P00734	622 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	CD40	P25942	277 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	KIR2DL3	P43628	341 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	SOX10	P56693	466 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	RIPK4	P57078	832 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	INHBE	P58166	350 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	RPS8	P62241	208 aa	Known RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	SMAD3	P84022	425 aa	Known RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	AIMP1	Q12904	312 aa	Known RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	SART3	Q15020	963 aa	Known RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	ARHGEF6	Q15052	776 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	MAN2A1	Q16706	1144 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	FNDC7	Q5VTL7	733 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	CREB3L3	Q68CJ9	461 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	KANSL1	Q7Z3B3	1105 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	ARMC9	Q7Z3E5	817 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	CCDC191	Q8NCU4	936 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	TBC1D16	Q8TBP0	767 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	FERMT2	Q96AC1	680 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	HIST1H2AH	Q96KK5	128 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	HIST1H2AJ	Q99878	128 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	THUMPD2	Q9BTF0	503 aa	Known RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	EPC1	Q9H2F5	836 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	MYOZ2	Q9NPC6	264 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	PPP2R3B	Q9Y5P8	575 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	SCN9A	Q15858	1988 aa		4.94	□□□□□ -1.62
LINC00343-210	ENST00000608220	ZNF646	O15015	1829 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	MANSC4	A6NHS7	340 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	CHL1	O00533	1208 aa		4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	PDE8A	O60658	829 aa		4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	FAM20B	O75063	409 aa		4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	PCCA	P05165	728 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	TMPO	P42166	694 aa	Known RBP	4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	TM4SF4	P48230	202 aa		4.93	□□□□□ -1.62
LINC00343-210	ENST00000608220	KPNA1	P52294	538 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms