RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TSR1Q2NL82 804 aaKnown RBP17.71■□□□□ 0.43
PMF1-206ENST00000606952 NOMO2Q5JPE7 1267 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 CYP26C1Q6V0L0 522 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
PMF1-206ENST00000606952 CYP3A43Q9HB55 503 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 ZNHIT6Q9NWK9 470 aaKnown RBP17.71■□□□□ 0.43
PMF1-206ENST00000606952 KANSL3Q9P2N6 904 aa17.71■□□□□ 0.43
PMF1-206ENST00000606952 BZW2Q9Y6E2 419 aaKnown RBP17.71■□□□□ 0.43
PMF1-206ENST00000606952 PPEF2O14830 753 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 SERPING1P05155 500 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 CCDC172P0C7W6 258 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 P4HA1P13674 534 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 TAF6P49848 677 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 ZNF132P52740 706 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 ASIC2Q16515 512 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 TMEM130Q8N3G9 435 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 TTC39CQ8N584 583 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 ARID3AQ99856 593 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 SYT11Q9BT88 431 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 ARHGAP20Q9P2F6 1191 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 ZKSCAN5Q9Y2L8 839 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
PMF1-206ENST00000606952 PCDHB7Q9Y5E2 793 aa17.7■□□□□ 0.42
PMF1-206ENST00000606952 MKI67P46013 3256 aaKnown RBP17.69■□□□□ 0.42
PMF1-206ENST00000606952 TMEM189-UBE2V1I3L0A0 370 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 EVI5O60447 810 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 GFPT2O94808 682 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 SKILP12757 684 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 YWHAEP62258 255 aaKnown RBP17.69■□□□□ 0.42
PMF1-206ENST00000606952 INCA1Q0VD86 236 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 UPP1Q16831 310 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 ARHGAP44Q17R89 818 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 ASTE1Q2TB18 679 aaPredicted RBP17.69■□□□□ 0.42
PMF1-206ENST00000606952 WDR72Q3MJ13 1102 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 SV2CQ496J9 727 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 CCDC170Q8IYT3 715 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 RNF169Q8NCN4 708 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 CASD1Q96PB1 797 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 CHP1Q99653 195 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 MRPL9Q9BYD2 267 aaKnown RBP17.69■□□□□ 0.42
PMF1-206ENST00000606952 GOLGA2P5Q9HBQ8 144 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.69■□□□□ 0.42
PMF1-206ENST00000606952 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
PMF1-206ENST00000606952 TULP1O00294 542 aaPredicted RBP17.68■□□□□ 0.42
PMF1-206ENST00000606952 FGFR1P11362 822 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 DPH6Q7L8W6 267 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 ZNF830Q96NB3 372 aaPredicted RBP17.68■□□□□ 0.42
PMF1-206ENST00000606952 RC3H2Q9HBD1 1191 aaKnown RBP17.68■□□□□ 0.42
PMF1-206ENST00000606952 KCND1Q9NSA2 647 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 TBC1D13Q9NVG8 400 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 LRFN2Q9ULH4 789 aa17.68■□□□□ 0.42
PMF1-206ENST00000606952 PODXLO00592 558 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 TACC1O75410 805 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 LCA5LO95447 670 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 PNMA6AP0CW24 399 aaPredicted RBP17.67■□□□□ 0.42
PMF1-206ENST00000606952 CLCN1P35523 988 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 LILRA4P59901 499 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 WDR5P61964 334 aaKnown RBP17.67■□□□□ 0.42
PMF1-206ENST00000606952 FPGSQ05932 587 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 KLHL30Q0D2K2 578 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 RAD9BQ6WBX8 426 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.67■□□□□ 0.42
PMF1-206ENST00000606952 SPATA18Q8TC71 538 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 ELMO3Q96BJ8 720 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 SDCBP2Q9H190 292 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.67■□□□□ 0.427e-11■■■■■ 48.1
PMF1-206ENST00000606952 CISHQ9NSE2 258 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 POLIQ9UNA4 740 aa17.67■□□□□ 0.42
PMF1-206ENST00000606952 SOWAHDA6NJG2 315 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 KPNA7A9QM74 516 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 SPTLC1O15269 473 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 CILPO75339 1184 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 DGKIO75912 1065 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 POMCP01189 267 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 AMHP03971 560 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 CLCNKBP51801 687 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 BPIFB4P59827 614 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 TNNC1P63316 161 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 PSRC1Q6PGN9 363 aaPredicted RBP17.66■□□□□ 0.42
PMF1-206ENST00000606952 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 C16orf59Q7L2K0 433 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 C7orf61Q8IZ16 206 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 TOP6BLQ8N6T0 577 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 EPS8L1Q8TE68 723 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 ZNF689Q96CS4 500 aaPredicted RBP17.66■□□□□ 0.42
PMF1-206ENST00000606952 TMEM175Q9BSA9 504 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 SMYD3Q9H7B4 428 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 NHEJ1Q9H9Q4 299 aaPredicted RBP17.66■□□□□ 0.42
PMF1-206ENST00000606952 NOCTQ9UK39 431 aaKnown RBP17.66■□□□□ 0.42
PMF1-206ENST00000606952 NENFQ9UMX5 172 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 INPP5FQ9Y2H2 1132 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 ATP8B3O60423 1300 aa17.66■□□□□ 0.42
PMF1-206ENST00000606952 EIF3CLB5ME19 914 aaKnown RBP17.65■□□□□ 0.42
PMF1-206ENST00000606952 B4GALT3O60512 393 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 DDHD2O94830 711 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 PTK2Q05397 1052 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms