RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 HAPLN3Q96S86 360 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ECSITQ9BQ95 431 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 TMEM120AQ9BXJ8 343 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 DDX43Q9NXZ2 648 aaKnown RBP13.15□□□□□ -0.3
CDCA3-212ENST00000604599 NEU2Q9Y3R4 380 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 CDK5RAP2Q96SN8 1893 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 H3BRJ5 948 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 EML1O00423 815 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 HNRNPRO43390 633 aaKnown RBP13.15□□□□□ -0.3
CDCA3-212ENST00000604599 OPHN1O60890 802 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 BANF1O75531 89 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 CALCAP01258 141 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ZSCAN5DPP0CG00 497 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 IMPDH2P12268 514 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 GZMAP12544 262 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ANPEPP15144 967 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 GAP43P17677 238 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 RFX1P22670 979 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 EFTUD2Q15029 972 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDCA3-212ENST00000604599 C2CD6Q53TS8 623 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 LLGL2Q6P1M3 1020 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ZCCHC9Q8N567 271 aaKnown RBP13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ZNF398Q8TD17 642 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 HIC2Q96JB3 615 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
CDCA3-212ENST00000604599 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 SENP1Q9P0U3 644 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 SLC17A7Q9P2U7 560 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 PCDHA1Q9Y5I3 950 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ZNFX1Q9P2E3 1918 aaKnown RBP13.15□□□□□ -0.31
CDCA3-212ENST00000604599 CHMP2AO43633 222 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 BMP3P12645 472 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 SLC18A1P54219 525 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 CDC16Q13042 620 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 ITPK1Q13572 414 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 RASA3Q14644 834 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 LRRC36Q1X8D7 754 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 ZBED8Q8IZ13 594 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 SLC25A41Q8N5S1 370 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 UVRAGQ9P2Y5 699 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 ZNF652Q9Y2D9 606 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 RARBP10826 455 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 RELL1Q8IUW5 271 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 TSSK1BQ9BXA7 367 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 ANKRD2Q9GZV1 360 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 DMAC2Q9NW81 257 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
CDCA3-212ENST00000604599 SLC26A4O43511 780 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 NOVP48745 357 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 CDK16Q00536 496 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 PICALMQ13492 652 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 QRICH1Q2TAL8 776 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 ODR4Q5SWX8 454 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 RIPOR1Q6ZS17 1223 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 SPATA24Q86W54 205 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 ST13P4Q8IZP2 240 aaPredicted RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 LENG9Q96B70 501 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 PLEKHG4BQ96PX9 1271 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 MMADHCQ9H3L0 296 aaPredicted RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 MANSC1Q9H8J5 431 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
CDCA3-212ENST00000604599 TMCO1Q9UM00 188 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 ROBO1Q9Y6N7 1651 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 A8MXQ7 604 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 B2RBV5 119 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 LDHCP07864 332 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 FAM200BP0CF97 657 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 ETS1P14921 441 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 CYP3A7P24462 503 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 CETN1Q12798 172 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 ZNF720Q7Z2F6 126 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 ANKMY2Q8IV38 441 aa13.13□□□□□ -0.31
CDCA3-212ENST00000604599 NAT14Q8WUY8 206 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms