RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 RTP2Q5QGT7 225 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 TDRD10Q5VZ19 366 aaKnown RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 FRMD5Q7Z6J6 570 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 PPP2R3CQ969Q6 453 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 METTL14Q9HCE5 456 aaKnown RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 SSX2IPQ9Y2D8 614 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 TSC2P49815 1807 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 COL6A3P12111 3177 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 FSD2A1L4K1 749 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 SPTLC1O15269 473 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 PHACTR2O75167 634 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 GNA14O95837 355 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 PAX3P23760 479 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 TKTP29401 623 aaKnown RBP16.77■□□□□ 0.28
CDCA3-211ENST00000603043 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-211ENST00000603043 SV2CQ496J9 727 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 TCEAL5Q5H9L2 206 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 DSTYKQ6XUX3 929 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 C11orf57Q6ZUT1 292 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-211ENST00000603043 ADGRD2Q7Z7M1 963 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-211ENST00000603043 MMRN2Q9H8L6 949 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 STXBP5LQ9Y2K9 1186 aa16.77■□□□□ 0.28
CDCA3-211ENST00000603043 SYCE3A1L190 88 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 KPNA7A9QM74 516 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 M0QZQ0 153 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 SYN3O14994 580 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.27
CDCA3-211ENST00000603043 PPP3CAQ08209 521 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 MYO1EQ12965 1108 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 TRPC3Q13507 836 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 ZACNQ401N2 412 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 SV2AQ7L0J3 742 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 PCDHB8Q9UN66 801 aa16.77■□□□□ 0.27
CDCA3-211ENST00000603043 PRUNE2Q8WUY3 3088 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 STX10O60499 249 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 LILRB3O75022 631 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
CDCA3-211ENST00000603043 GCLMP48507 274 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 CCDC85BQ15834 202 aaPredicted RBP16.76■□□□□ 0.27
CDCA3-211ENST00000603043 PDXDC1Q6P996 788 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 RBM23Q86U06 439 aaKnown RBP16.76■□□□□ 0.27
CDCA3-211ENST00000603043 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 PIK3R5Q8WYR1 880 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 SENP8Q96LD8 212 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 BRWD1Q9NSI6 2320 aa16.76■□□□□ 0.27
CDCA3-211ENST00000603043 PER2O15055 1255 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 CCDC192P0DO97 292 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 ODC1P11926 461 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 GTF2H1P32780 548 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 NRIP1P48552 1158 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 PRSS55Q6UWB4 352 aaPredicted RBP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 MAFAQ8NHW3 353 aaPredicted RBP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 PPM1EQ8WY54 764 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 EMILIN2Q9BXX0 1053 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 TLE6Q9H808 572 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 ARHGEF37A1IGU5 675 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 MARSP56192 900 aaKnown RBP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 CREMQ03060 361 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 NCOA4Q13772 614 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 PSMD5Q16401 504 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 VARS2Q5ST30 1063 aaKnown RBP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 KRT39Q6A163 491 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 ANKS3Q6ZW76 656 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
CDCA3-211ENST00000603043 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
CDCA3-211ENST00000603043 CYB561D2O14569 222 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 VNN1O95497 513 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 CNPP09543 421 aaKnown RBP16.74■□□□□ 0.27
CDCA3-211ENST00000603043 MXI1P50539 228 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 MYL6P60660 151 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 HYAL1Q12794 435 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 DUSP6Q16828 381 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 ANO6Q4KMQ2 910 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 TRIM59Q8IWR1 403 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 CNOT6LQ96LI5 555 aaKnown RBP16.74■□□□□ 0.27
CDCA3-211ENST00000603043 CDCA3Q99618 268 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-211ENST00000603043 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
CDCA3-211ENST00000603043 THAP9Q9H5L6 903 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 RXFP1Q9HBX9 757 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 NFE2L3Q9Y4A8 694 aa16.74■□□□□ 0.27
CDCA3-211ENST00000603043 TIMM13Q9Y5L4 95 aaPredicted RBP16.74■□□□□ 0.27
CDCA3-211ENST00000603043 SNX9Q9Y5X1 595 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms