RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 NAB2Q15742 525 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 TRIM60Q495X7 471 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 CCDC122Q5T0U0 273 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 C9orf57Q5W0N0 161 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 SCARA5Q6ZMJ2 495 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 GLYCTKQ8IVS8 523 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 RNF169Q8NCN4 708 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 DIS3LQ8TF46 1054 aaKnown RBP19.27■□□□□ 0.67
VRK3-225ENST00000601912 LPPQ93052 612 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 ZFP42Q96MM3 310 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 GAD1Q99259 594 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 BCO2Q9BYV7 579 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 HIPK3Q9H422 1215 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 CYP3A43Q9HB55 503 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 CISHQ9NSE2 258 aa19.27■□□□□ 0.67
VRK3-225ENST00000601912 KIF5CO60282 957 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 WEE2P0C1S8 567 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 CD58P19256 250 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 MLH1P40692 756 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 PNPLA4P41247 253 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 FAAP100Q0VG06 881 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 AGMOQ6ZNB7 445 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 SLC24A5Q71RS6 500 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 NOP9Q86U38 636 aaKnown RBP19.26■□□□□ 0.67
VRK3-225ENST00000601912 ZNF677Q86XU0 584 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 ECHDC2Q86YB7 292 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
VRK3-225ENST00000601912 RBBP8NLQ8NC74 664 aaPredicted RBP19.26■□□□□ 0.67
VRK3-225ENST00000601912 SLC30A5Q8TAD4 765 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 ZNF560Q96MR9 790 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 FAM124BQ9H5Z6 455 aaPredicted RBP19.26■□□□□ 0.67
VRK3-225ENST00000601912 C11orf49Q9H6J7 331 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 RSAD1Q9HA92 442 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 RNF19AQ9NV58 838 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 NOCTQ9UK39 431 aaKnown RBP19.26■□□□□ 0.67
VRK3-225ENST00000601912 POLIQ9UNA4 740 aa19.26■□□□□ 0.67
VRK3-225ENST00000601912 A0A0U1RQJ8 604 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 ANO9A1A5B4 782 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 ARL5CA6NH57 179 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 MEIS3P2A8K0S8 358 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 PTGESO14684 152 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 EOMESO95936 686 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 THP07101 528 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 ARHGAP25P42331 645 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 CDR2Q01850 454 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 TMEM130Q8N3G9 435 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 TTC39CQ8N584 583 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 UBR7Q8N806 425 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 LNX1Q8TBB1 728 aaPredicted RBP19.25■□□□□ 0.67
VRK3-225ENST00000601912 SLC20A1Q8WUM9 679 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 ATRIPQ8WXE1 791 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 SEPT8Q92599 483 aa19.25■□□□□ 0.67
VRK3-225ENST00000601912 PPP1R10Q96QC0 940 aaKnown RBP19.25■□□□□ 0.67
VRK3-225ENST00000601912 PIRO00625 290 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 NBNO60934 754 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 IBSPP21815 317 aaPredicted RBP19.24■□□□□ 0.67
VRK3-225ENST00000601912 ETF1P62495 437 aaKnown RBP19.24■□□□□ 0.67
VRK3-225ENST00000601912 TAF3Q5VWG9 929 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 APBB2Q92870 758 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 MMS19Q96T76 1030 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 TSPYL2Q9H2G4 693 aaPredicted RBP19.24■□□□□ 0.67
VRK3-225ENST00000601912 ACP6Q9NPH0 428 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 GUCA1BQ9UMX6 200 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 ATP11BQ9Y2G3 1177 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 PDCD11Q14690 1871 aaKnown RBP19.24■□□□□ 0.67
VRK3-225ENST00000601912 C9IYK1 514 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 PJA2O43164 708 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 PLEKHG4Q58EX7 1191 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 GSTCDQ8NEC7 633 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 PAWRQ96IZ0 340 aaKnown RBP19.24■□□□□ 0.67
VRK3-225ENST00000601912 LACRTQ9GZZ8 138 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 MYO1AQ9UBC5 1043 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 INTUQ9ULD6 942 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 NENFQ9UMX5 172 aa19.24■□□□□ 0.67
VRK3-225ENST00000601912 RCCD1A6NED2 376 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 H2AFZP0C0S5 128 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 CHRNB2P17787 502 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 LRPAP1P30533 357 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 GNA15P30679 374 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 ZNF132P52740 706 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 GNG11P61952 73 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 SOX4Q06945 474 aaPredicted RBP19.23■□□□□ 0.67
VRK3-225ENST00000601912 H2AFVQ71UI9 128 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 NECAB2Q7Z6G3 386 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 ZNF598Q86UK7 904 aaKnown RBP19.23■□□□□ 0.67
VRK3-225ENST00000601912 RTN4RL1Q86UN2 441 aaPredicted RBP19.23■□□□□ 0.67
VRK3-225ENST00000601912 DBF4BQ8NFT6 615 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 DDX1Q92499 740 aaKnown RBP19.23■□□□□ 0.67
VRK3-225ENST00000601912 PDCL3Q9H2J4 239 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 SMYD3Q9H7B4 428 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 TFR2Q9UP52 801 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 SNX9Q9Y5X1 595 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 ATP8B3O60423 1300 aa19.23■□□□□ 0.67
VRK3-225ENST00000601912 MMEP08473 750 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 GZMAP12544 262 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 TAF6P49848 677 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 SCNN1GP51170 649 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 FAM189BP81408 668 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 FMO1Q01740 532 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 SV2CQ496J9 727 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms