RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 KCNJ12Q14500 433 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 SLC27A1Q6PCB7 646 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 MAP4K3Q8IVH8 894 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 CCDC105Q8IYK2 499 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 NOC3LQ8WTT2 800 aaKnown RBP13.75□□□□□ -0.21
UPF1-208ENST00000600012 NXPE3Q969Y0 559 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 THAP9Q9H5L6 903 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 TMEM206Q9H813 350 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 ADAM28Q9UKQ2 775 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 TRAF3IP3Q9Y228 551 aa13.75□□□□□ -0.21
UPF1-208ENST00000600012 DOCK6Q96HP0 2047 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 A0A1B0GUA9 196 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 H0YCG3 227 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 B4GALT5O43286 388 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 PI15O43692 258 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 NARSO43776 548 aaKnown RBP13.74□□□□□ -0.21
UPF1-208ENST00000600012 NPTXRO95502 500 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 NR3C1P04150 777 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 NR2F2P24468 414 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 AKAP5P24588 427 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 DEKP35659 375 aaKnown RBP13.74□□□□□ -0.21
UPF1-208ENST00000600012 ZNF75DP51815 510 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 CDCA2Q69YH5 1023 aaPredicted RBP13.74□□□□□ -0.21
UPF1-208ENST00000600012 FOXR2Q6PJQ5 311 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 FRMD5Q7Z6J6 570 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 PALB2Q86YC2 1186 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 IRF2BP1Q8IU81 584 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 ZC3H3Q8IXZ2 948 aaKnown RBP13.74□□□□□ -0.21
UPF1-208ENST00000600012 ZNF707Q96C28 371 aaPredicted RBP13.74□□□□□ -0.21
UPF1-208ENST00000600012 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
UPF1-208ENST00000600012 PRIMPOLQ96LW4 560 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 MYADMQ96S97 322 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 GPR62Q9BZJ7 368 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 PIDD1Q9HB75 910 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 AGPAT3Q9NRZ7 376 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
UPF1-208ENST00000600012 IFNKQ9P0W0 207 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 KCNG1Q9UIX4 513 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 EXOC7Q9UPT5 735 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 USP20Q9Y2K6 914 aa13.74□□□□□ -0.21
UPF1-208ENST00000600012 GVINP1Q7Z2Y8 2422 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.21
UPF1-208ENST00000600012 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 TGM5O43548 720 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 SERPINC1P01008 464 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 EDN1P05305 212 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 CFHP08603 1231 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 SPATA31D3P0C874 917 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 SRFP11831 508 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 CYP2J2P51589 502 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 FKBP3Q00688 224 aaKnown RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 SPAG1Q07617 926 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 KRT31Q15323 416 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 ANGPT1Q15389 498 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 TCP11X2Q5H9J9 407 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 SPATA31D4Q6ZUB0 917 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 CDR2LQ86X02 465 aaPredicted RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 FAM114A1Q8IWE2 563 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 SLC44A3Q8N4M1 653 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 DTWD2Q8NBA8 298 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 RSAD2Q8WXG1 361 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 RIN2Q8WYP3 895 aaPredicted RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 ANP32BQ92688 251 aaKnown RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 PRKD2Q9BZL6 878 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 XPO4Q9C0E2 1151 aaKnown RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 PRMT7Q9NVM4 692 aaPredicted RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 TAB2Q9NYJ8 693 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
UPF1-208ENST00000600012 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
UPF1-208ENST00000600012 ANK1P16157 1881 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 K7ERI5 159 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 STK25O00506 426 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 CETN3O15182 167 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 TADA2AO75478 443 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 ZMYND10O75800 440 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 FGFR1OPO95684 399 aaKnown RBP13.72□□□□□ -0.21
UPF1-208ENST00000600012 RFX1P22670 979 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 EEF1GP26641 437 aaKnown RBP13.72□□□□□ -0.21
UPF1-208ENST00000600012 STRN3Q13033 797 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 ADAM9Q13443 819 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 TUSC3Q13454 348 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
UPF1-208ENST00000600012 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
UPF1-208ENST00000600012 SLC39A4Q6P5W5 647 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms