RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 GIT1Q9Y2X7 761 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 PCDHGA5Q9Y5G8 931 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 CDY1Q9Y6F8 540 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 ADAMTS20P59510 1910 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 DMXL2Q8TDJ6 3036 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 SMG1Q96Q15 3661 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 FAM237AA0A1B0GTK4 181 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 WDR27A2RRH5 827 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 MARCH6O60337 910 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 GADD45BO75293 160 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 PTPN2P17706 415 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 RAB33AQ14088 237 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 UVSSAQ2YD98 709 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 PRSS36Q5K4E3 855 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 TXNDC11Q6PKC3 985 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 SHC4Q6S5L8 630 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 AK8Q96MA6 479 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 ZSWIM3Q96MP5 696 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 TRPV5Q9NQA5 729 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 LAMA1P25391 3075 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 IGSF10Q6WRI0 2623 aa15.24■□□□□ 0.03
SHKBP1-218ENST00000598907 NPTXRO95502 500 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 CMA1P23946 247 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 CCR2P41597 374 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 CREB5Q02930 508 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 PDZD4Q76G19 769 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 YAF2Q8IY57 180 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 DEFB124Q8NES8 71 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 DEPDC1BQ8WUY9 529 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 SMARCD2Q92925 531 aa15.23■□□□□ 0.03
SHKBP1-218ENST00000598907 MAST4O15021 2626 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 LOC400499M0QZD8 3231 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 LNP1A1A4G5 178 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 GOLGA6L22H0YM25 854 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 INO80B-WBP1J3KQ70 363 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 EML1O00423 815 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 PRRG1O14668 218 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 GJA1P17302 382 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 UBE2HP62256 183 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 TUSC3Q13454 348 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 PON2Q15165 354 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 UAP1L1Q3KQV9 507 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 DGKKQ5KSL6 1271 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 PKN3Q6P5Z2 889 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 ZSCAN18Q8TBC5 510 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 MMTAG2Q9BU76 263 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 RAB34Q9BZG1 259 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 CCSER1Q9C0I3 900 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 LRWD1Q9UFC0 647 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 NEUROG3Q9Y4Z2 214 aa15.22■□□□□ 0.03
SHKBP1-218ENST00000598907 EIF4E1BA6NMX2 242 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 SPECC1L-ADORA2AF8WAN1 911 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 ARNTLO00327 626 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 SLC26A4O43511 780 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 CEACAM1P13688 526 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 HOXA6P31267 233 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 EPHA7Q15375 998 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 COL28A1Q2UY09 1125 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 RDM1Q8NG50 284 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 EPSTI1Q96J88 318 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 CEP170P1Q96L14 293 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 SLITRK6Q9H5Y7 841 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 AVENQ9NQS1 362 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 MTRRQ9UBK8 725 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 HPSEQ9Y251 543 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
SHKBP1-218ENST00000598907 EML5Q05BV3 1969 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 PP2D1A8MPX8 630 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 HEPACAM2A8MVW5 462 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 B4GALT5O43286 388 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 CAVIN2O95810 425 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 PRKCBP05771 671 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 MYL4P12829 197 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 ARF4P18085 180 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 CDC25AP30304 524 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 AXLP30530 894 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 CTHP32929 405 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 ARPP19P56211 112 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 EMC2Q15006 297 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 PLK5Q496M5 336 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 HYIQ5T013 277 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 NCAPH2Q6IBW4 605 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 HS6ST3Q8IZP7 471 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 RSPRY1Q96DX4 576 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 MSANTD3Q96H12 275 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 HSD17B14Q9BPX1 270 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 TMEM9BQ9NQ34 198 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 GPSM3Q9Y4H4 160 aa15.2■□□□□ 0.02
SHKBP1-218ENST00000598907 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 I3L4J1 428 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms