RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 RRAGBQ5VZM2 374 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 USP49Q70CQ1 688 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 CATSPER3Q86XQ3 398 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 C4orf19Q8IY42 314 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 TAB3Q8N5C8 712 aaPredicted RBP11.48□□□□□ -0.57
SMG9-207ENST00000598860 FBLIM1Q8WUP2 373 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
SMG9-207ENST00000598860 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 FAM167AQ96KS9 214 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 LXNQ9BS40 222 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 WNT10AQ9GZT5 417 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 CCDC113Q9H0I3 377 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 TRPV6Q9H1D0 765 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 SMARCAD1Q9H4L7 1026 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 ZNF302Q9NR11 478 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 FAM105AQ9NUU6 356 aa11.48□□□□□ -0.57
SMG9-207ENST00000598860 DDX19AQ9NUU7 478 aaKnown RBP11.48□□□□□ -0.57
SMG9-207ENST00000598860 ZNF215Q9UL58 517 aaPredicted RBP11.48□□□□□ -0.57
SMG9-207ENST00000598860 MED24O75448 989 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 ZNF202O95125 648 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 CDC25AP30304 524 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 STAT5BP51692 787 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 NDUFA8P51970 172 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 ETF1P62495 437 aaKnown RBP11.47□□□□□ -0.57
SMG9-207ENST00000598860 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 GRB10Q13322 594 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 KARSQ15046 597 aaKnown RBP11.47□□□□□ -0.57
SMG9-207ENST00000598860 SHHQ15465 462 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 KLHL40Q2TBA0 621 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 MFSD5Q6N075 450 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 NFRKBQ6P4R8 1299 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 BEND4Q6ZU67 534 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 PLPPR4Q7Z2D5 763 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 CCDC60Q8IWA6 550 aaPredicted RBP11.47□□□□□ -0.57
SMG9-207ENST00000598860 ELOA2Q8IYF1 753 aaPredicted RBP11.47□□□□□ -0.57
SMG9-207ENST00000598860 CEP57L1Q8IYX8 460 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 ENGASEQ8NFI3 743 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 MICAL1Q8TDZ2 1067 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 LRRC27Q9C0I9 530 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 GOLPH3LQ9H4A5 285 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 GABBR1Q9UBS5 961 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
SMG9-207ENST00000598860 HOOK1Q9UJC3 728 aaKnown RBP11.47□□□□□ -0.57
SMG9-207ENST00000598860 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 B4GALT4O60513 344 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 SLITRK3O94933 977 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 LGALS2P05162 132 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 MYL1P05976 194 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 NME1P15531 152 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 RAB6AP20340 208 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 ZRSR1Q15695 479 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 XKR3Q5GH77 459 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 ZBTB37Q5TC79 503 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 SWSAP1Q6NVH7 229 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 TPH2Q8IWU9 490 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 TMEM199Q8N511 208 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 PDILTQ8N807 584 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 LARP4BQ92615 738 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 GLG1Q92896 1179 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 DHX58Q96C10 678 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 ACSF2Q96CM8 615 aaPredicted RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 KATNAL1Q9BW62 490 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 TNMDQ9H2S6 317 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 HIPK3Q9H422 1215 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 GSX1Q9H4S2 264 aaPredicted RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 BCAS3Q9H6U6 928 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 C7orf69Q9H7B7 122 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 RGL1Q9NZL6 768 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.57
SMG9-207ENST00000598860 DNM3Q9UQ16 869 aa11.46□□□□□ -0.57
SMG9-207ENST00000598860 LTBP2Q14767 1821 aa11.46□□□□□ -0.58
SMG9-207ENST00000598860 A0A087X0B3 334 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 HMX2A2RU54 273 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 EYA4O95677 639 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 ACRP10323 421 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 CYP2C18P33260 490 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 EPHB4P54760 987 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 AMPD3Q01432 767 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 PRKCEQ02156 737 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 PPIGQ13427 754 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMG9-207ENST00000598860 SNW1Q13573 536 aaKnown RBP11.45□□□□□ -0.58
SMG9-207ENST00000598860 C9orf50Q5SZB4 431 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 CDCP2Q5VXM1 449 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 KRBA2Q6ZNG9 492 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 CNNM3Q8NE01 707 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 GPT2Q8TD30 523 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 RAD54LQ92698 747 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 FAM83CQ9BQN1 747 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 YIPF2Q9BWQ6 316 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 NUP62CLQ9H1M0 184 aa11.45□□□□□ -0.58
SMG9-207ENST00000598860 ATXN3LQ9H3M9 355 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms