RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 AFF4Q9UHB7 1163 aaKnown RBP16.48■□□□□ 0.23
TGFB1-202ENST00000597453 SCN1AP35498 2009 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 EP300Q09472 2414 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 WDR87Q6ZQQ6 2873 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 A0A0B4J269 797 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 TISP43B9A030 160 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 TBCAO75347 108 aaKnown RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 ECI2O75521 394 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 VNN2O95498 520 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 ADRB2P07550 413 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 CPB1P15086 417 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 FCARP24071 287 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 PKP1Q13835 747 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 MLF2Q15773 248 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 ZC2HC1CQ53FD0 456 aaPredicted RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 TANGO2Q6ICL3 276 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 MAP4K3Q8IVH8 894 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 HS6ST3Q8IZP7 471 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 EPSTI1Q96J88 318 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 MSTO1Q9BUK6 570 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 CEP72Q9P209 647 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 CPSF3Q9UKF6 684 aaKnown RBP16.47■□□□□ 0.23
TGFB1-202ENST00000597453 COL4A2P08572 1712 aa16.47■□□□□ 0.23
TGFB1-202ENST00000597453 ZNF292O60281 2723 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 ANKRD63C9JTQ0 380 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 MOSPD3O75425 235 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 OAZ2O95190 189 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 OR4Q2P0C623 313 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 SCP2P22307 547 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 NASPP49321 788 aaPredicted RBP16.46■□□□□ 0.23
TGFB1-202ENST00000597453 GTF2BQ00403 316 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 TWF1Q12792 350 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 KYAT1Q16773 422 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 SLC44A4Q53GD3 710 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 JADE1Q6IE81 842 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 PDZD4Q76G19 769 aaPredicted RBP16.46■□□□□ 0.23
TGFB1-202ENST00000597453 FAM212AQ96EL1 285 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 SHDQ96IW2 340 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
TGFB1-202ENST00000597453 PGLYRP2Q96PD5 576 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 CCSER1Q9C0I3 900 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 IKZF4Q9H2S9 585 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 CRISPLD1Q9H336 500 aa16.46■□□□□ 0.23
TGFB1-202ENST00000597453 FBXO2Q9UK22 296 aaPredicted RBP16.46■□□□□ 0.23
TGFB1-202ENST00000597453 MTF2Q9Y483 593 aaPredicted RBP16.46■□□□□ 0.23
TGFB1-202ENST00000597453 TCHHQ07283 1943 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 F5P12259 2224 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 KANSL1LA0AUZ9 987 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 SPTLC1O15269 473 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 NFICP08651 508 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 CD72P21854 359 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 DDIT3P35638 169 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 PFKPQ01813 784 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
TGFB1-202ENST00000597453 PRKCQQ04759 706 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 SLC39A14Q15043 492 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 FAM78AQ5JUQ0 283 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
TGFB1-202ENST00000597453 SPATA1Q5VX52 437 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 DSTYKQ6XUX3 929 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 BEST2Q8NFU1 509 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
TGFB1-202ENST00000597453 YIPF1Q9Y548 306 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 SRPRBQ9Y5M8 271 aaKnown RBP16.45■□□□□ 0.22
TGFB1-202ENST00000597453 R4GN57 208 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 TICRRQ7Z2Z1 1910 aa16.45■□□□□ 0.22
TGFB1-202ENST00000597453 XPOTO43592 962 aaKnown RBP16.44■□□□□ 0.22
TGFB1-202ENST00000597453 MICAL2O94851 1124 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 GJA1P17302 382 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 ACOT2P49753 483 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 GRM2Q14416 872 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 UBXN2BQ14CS0 331 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 CYP4A22Q5TCH4 519 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 C9orf57Q5W0N0 161 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 IQCEQ6IPM2 695 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 C1orf210Q8IVY1 113 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 LINC00301Q8NCQ3 95 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 ELSPBP1Q96BH3 223 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 ZNF512Q96ME7 567 aaPredicted RBP16.44■□□□□ 0.22
TGFB1-202ENST00000597453 ZSWIM3Q96MP5 696 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 CLIC6Q96NY7 704 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 MAFFQ9ULX9 164 aa16.44■□□□□ 0.22
TGFB1-202ENST00000597453 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.44■□□□□ 0.22
TGFB1-202ENST00000597453 SHISA7A6NL88 538 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 ZNF197O14709 1029 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 YEATS4O95619 227 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 SP9P0CG40 484 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 MYL4P12829 197 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 EPHA5P54756 1037 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 LILRA4P59901 499 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 DUSP4Q13115 394 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 ATL3Q6DD88 541 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 ADALQ6DHV7 355 aa16.43■□□□□ 0.22
TGFB1-202ENST00000597453 OVOS1Q6IE37 1185 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms