RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.82■□□□□ 0.92
PNKP-207ENST00000596014 MICALL1Q8N3F8 863 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 LRRC52Q8N7C0 313 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 METTL14Q9HCE5 456 aaKnown RBP20.82■□□□□ 0.92
PNKP-207ENST00000596014 R3HCC1Q9Y3T6 440 aaKnown RBP20.82■□□□□ 0.92
PNKP-207ENST00000596014 M0QZQ0 153 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 GNA14O95837 355 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 TKTP29401 623 aaKnown RBP20.81■□□□□ 0.92
PNKP-207ENST00000596014 PNPLA4P41247 253 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 PPP3CAQ08209 521 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 CCDC40Q4G0X9 1142 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 TDRD10Q5VZ19 366 aaKnown RBP20.81■□□□□ 0.92
PNKP-207ENST00000596014 LRSAM1Q6UWE0 723 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 DSTYKQ6XUX3 929 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 SV2AQ7L0J3 742 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 ADGRD2Q7Z7M1 963 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 ZNF560Q96MR9 790 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 SSX2IPQ9Y2D8 614 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 STXBP5LQ9Y2K9 1186 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 PRUNE2Q8WUY3 3088 aa20.81■□□□□ 0.92
PNKP-207ENST00000596014 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 SYN3O14994 580 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 CA8P35219 290 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 GCLMP48507 274 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 BIRC3Q13489 604 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 TPD52L1Q16890 204 aaPredicted RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 ZACNQ401N2 412 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 SV2CQ496J9 727 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 TCEAL5Q5H9L2 206 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 C15orf39Q6ZRI6 1047 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 C11orf57Q6ZUT1 292 aaPredicted RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 GPR65Q8IYL9 337 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 RIN2Q8WYP3 895 aaPredicted RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 SENP8Q96LD8 212 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 KPNA7A9QM74 516 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 PHACTR2O75167 634 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 GTF2H1P32780 548 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 MARSP56192 900 aaKnown RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 CCDC85BQ15834 202 aaPredicted RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 DCAF17Q5H9S7 520 aaPredicted RBP20.8■□□□□ 0.92
PNKP-207ENST00000596014 TCERG1LQ5VWI1 586 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 PIK3R5Q8WYR1 880 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 PPP2R3CQ969Q6 453 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 HPDLQ96IR7 371 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 DNAJC25Q9H1X3 360 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 TLE6Q9H808 572 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 PCDHB8Q9UN66 801 aa20.8■□□□□ 0.92
PNKP-207ENST00000596014 SPTBN5Q9NRC6 3674 aaKnown RBP20.79■□□□□ 0.92
PNKP-207ENST00000596014 CCDC192P0DO97 292 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 MYO1EQ12965 1108 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 TRPC3Q13507 836 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 PRSS55Q6UWB4 352 aaPredicted RBP20.79■□□□□ 0.92
PNKP-207ENST00000596014 RBM23Q86U06 439 aaKnown RBP20.79■□□□□ 0.92
PNKP-207ENST00000596014 IRF2BP1Q8IU81 584 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 LNX1Q8TBB1 728 aaPredicted RBP20.79■□□□□ 0.92
PNKP-207ENST00000596014 ENOX1Q8TC92 643 aaKnown RBP20.79■□□□□ 0.92
PNKP-207ENST00000596014 SLC35C1Q96A29 364 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 MMRN2Q9H8L6 949 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 BRWD1Q9NSI6 2320 aa20.79■□□□□ 0.92
PNKP-207ENST00000596014 CYB561D2O14569 222 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 PER2O15055 1255 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 STX10O60499 249 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 VNN1O95497 513 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 CNPP09543 421 aaKnown RBP20.78■□□□□ 0.92
PNKP-207ENST00000596014 NCOA4Q13772 614 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 VARS2Q5ST30 1063 aaKnown RBP20.78■□□□□ 0.92
PNKP-207ENST00000596014 APPL2Q8NEU8 664 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 FUCA2Q9BTY2 467 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 RXFP1Q9HBX9 757 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 TMEM8AQ9HCN3 771 aa20.78■□□□□ 0.92
PNKP-207ENST00000596014 TIMM13Q9Y5L4 95 aaPredicted RBP20.78■□□□□ 0.92
PNKP-207ENST00000596014 NRIP1P48552 1158 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 MYL6P60660 151 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 HYAL1Q12794 435 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 KRT39Q6A163 491 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 PDXDC1Q6P996 788 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 ANKS3Q6ZW76 656 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 TRIM59Q8IWR1 403 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 PPM1EQ8WY54 764 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 KLHL5Q96PQ7 755 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 EMILIN2Q9BXX0 1053 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 XYLT2Q9H1B5 865 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 THAP9Q9H5L6 903 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.77■□□□□ 0.92
PNKP-207ENST00000596014 GDAP2Q9NXN4 497 aa20.77■□□□□ 0.92
PNKP-207ENST00000596014 TEX28O15482 410 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 ODC1P11926 461 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 RPL17P18621 184 aaKnown RBP20.77■□□□□ 0.91
PNKP-207ENST00000596014 TYMPP19971 482 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 ATICP31939 592 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 GTF2F1P35269 517 aaKnown RBP eCLIP20.77■□□□□ 0.917e-8■■■□□ 17.9
PNKP-207ENST00000596014 MRPL58Q14197 206 aaKnown RBP20.77■□□□□ 0.91
PNKP-207ENST00000596014 PSMD5Q16401 504 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 DUSP6Q16828 381 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 ANO6Q4KMQ2 910 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 MAFAQ8NHW3 353 aaPredicted RBP20.77■□□□□ 0.91
PNKP-207ENST00000596014 CNOT6LQ96LI5 555 aaKnown RBP20.77■□□□□ 0.91
PNKP-207ENST00000596014 FNIP2Q9P278 1114 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 NFE2L3Q9Y4A8 694 aa20.77■□□□□ 0.91
PNKP-207ENST00000596014 SNX9Q9Y5X1 595 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms