RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 NT5DC4Q86YG4 428 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 C12orf56Q8IXR9 622 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 NOC3LQ8WTT2 800 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 BORCS6Q96GS4 357 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 RIPOR3Q96MK2 946 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 RHOBTB2Q9BYZ6 727 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 GZF1Q9H116 711 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 EPHX3Q9H6B9 360 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF318Q5VUA4 2279 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 C2CD4DB7Z1M9 353 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 ABLIM3O94929 683 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 OAZ2O95190 189 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 CYP2J2P51589 502 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 SNRPFP62306 86 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 PSMD2Q13200 908 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 PNOCQ13519 176 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 SNRNP35Q16560 246 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 CTXN3Q4LDR2 81 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 ATAT1Q5SQI0 421 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 RNF135Q8IUD6 432 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 APPL2Q8NEU8 664 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 OR5B17Q8NGF7 314 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 SENP8Q96LD8 212 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 PRKD2Q9BZL6 878 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 ZDHHC7Q9NXF8 308 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 DPP7Q9UHL4 492 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 SIX4Q9UIU6 781 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 OBSL1O75147 1896 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 GREB1Q4ZG55 1949 aa11.88□□□□□ -0.51
SHKBP1-206ENST00000595523 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 PI4K2BG5E9Z4 385 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 H7C4K7 107 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 N4BP1O75113 896 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 SEC24AO95486 1093 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 VNN2O95498 520 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 ITGB3P05106 788 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 CYP11A1P05108 521 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 C8AP07357 584 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 TYMPP19971 482 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 TAF6P49848 677 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 KCNB1Q14721 858 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF280DQ6N043 979 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 DSTYKQ6XUX3 929 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 HS2ST1Q7LGA3 356 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 XXYLT1Q8NBI6 393 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 RDH13Q8NBN7 331 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF461Q8TAF7 563 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 SLC7A14Q8TBB6 771 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 TMEM174Q8WUU8 243 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 SMG7Q92540 1137 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 RTP3Q9BQQ7 232 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 C11orf16Q9NQ32 467 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 INTS13Q9NVM9 706 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 CGNQ9P2M7 1197 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 MUTYHQ9UIF7 546 aa11.87□□□□□ -0.51
SHKBP1-206ENST00000595523 CLUHO75153 1309 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 HNRNPA1P09651 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 OR4Q2P0C623 313 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 ATF2P15336 505 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 HOXA9P31269 272 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 ARPP19P56211 112 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 CYP24A1Q07973 514 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 PSMD6Q15008 389 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 ELMSAN1Q6PJG2 1045 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 CCDC149Q6ZUS6 474 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 SLC9A9Q8IVB4 645 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 SMYD4Q8IYR2 804 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 OR10T2Q8NGX3 314 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 ERCC4Q92889 916 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 TMEM209Q96SK2 561 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 KIAA1586Q9HCI6 787 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 CHMP5Q9NZZ3 219 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 ITGA11Q9UKX5 1188 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF638Q14966 1978 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 KPNA7A9QM74 516 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms