RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PLPPR4Q7Z2D5 763 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 RHOT2Q8IXI1 618 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 LRRC45Q96CN5 670 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 TBC1D31Q96DN5 1066 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 NLRP4Q96MN2 994 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 CPSF2Q9P2I0 782 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 NOC2LQ9Y3T9 749 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 NFS1Q9Y697 457 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 ADGRA2Q96PE1 1338 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ESYT3A0FGR9 886 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 VNN1O95497 513 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ADORA2AP29274 412 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 CDR2Q01850 454 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 KCTD19Q17RG1 926 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 CCDC63Q8NA47 563 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 OR5B17Q8NGF7 314 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ITFG2Q969R8 447 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 CENPTQ96BT3 561 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 THOC1Q96FV9 657 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 SLC12A4Q9UP95 1085 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 CCL15-CCL14A0A0B4J2E2 113 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ASB14A6NK59 587 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 BTBD19C9JJ37 291 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 PGRMC1O00264 195 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 MSCO60682 206 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 DRD4P21917 467 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 EFNA5P52803 228 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 IGBP1P78318 339 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ENPEPQ07075 957 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 CCL15Q16663 113 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 CPLX4Q7Z7G2 160 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ACTRT1Q8TDG2 376 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 SCFD2Q8WU76 684 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 FAM210AQ96ND0 272 aa18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.17■□□□□ 0.57e-6■■■■□ 21.2
SHKBP1-205ENST00000594973 MRPL4Q9BYD3 311 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-205ENST00000594973 ZC3H11AO75152 810 aaKnown RBP eCLIP18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 GZMAP12544 262 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 ALADP13716 330 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 MXD4Q14582 209 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 ZNF268Q14587 947 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 SCARA3Q6AZY7 606 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 MORC4Q8TE76 937 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 DDX1Q92499 740 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 KCNN1Q92952 543 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 SMARCAD1Q9H4L7 1026 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 CNOT10Q9H9A5 744 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.16■□□□□ 0.51e-8■■■■■ 45.1
SHKBP1-205ENST00000594973 KRIT1O00522 736 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 AHCYL1O43865 530 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 PRKCBP05771 671 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 CLCN3P51790 818 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 TNNC1P63316 161 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 CCNA1P78396 465 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 MAPK6Q16659 721 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 ENOSF1Q7L5Y1 443 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 ZBTB8OSQ8IWT0 167 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 ANKS4BQ8N8V4 417 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 CCDC197Q8NCU1 140 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 MS4A4AQ96JQ5 239 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 CALR3Q96L12 384 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 TMEM59LQ9UK28 342 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 ALG6Q9Y672 507 aa18.16■□□□□ 0.5
SHKBP1-205ENST00000594973 CNTNAP2Q9UHC6 1331 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 RAD51CO43502 376 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 TOM1L1O75674 476 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 FESP07332 822 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 CETPP11597 493 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 HSD17B3P37058 310 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 CUL1Q13616 776 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ITIH4Q14624 930 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 MESDQ14696 234 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ZPBP2Q6X784 338 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 CDR2LQ86X02 465 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ZNF653Q96CK0 615 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 CGRRF1Q99675 332 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 CCDC113Q9H0I3 377 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 APOBEC3GQ9HC16 384 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 INO80B-WBP1J3KQ70 363 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 DDX3YO15523 660 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ITGA4P13612 1032 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ZNF211Q13398 564 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 MTMR3Q13615 1198 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 DCAF12L1Q5VU92 463 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 EFCAB12Q6NXP0 572 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 BRI3BPQ8WY22 251 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 BTBD6Q96KE9 485 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ANKRD27Q96NW4 1050 aa18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 ACO2Q99798 780 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 INO80BQ9C086 356 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-205ENST00000594973 CENPFP49454 3210 aa18.14■□□□□ 0.5
SHKBP1-205ENST00000594973 LUC7L3O95232 432 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 FGGP02679 453 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF844Q08AG5 666 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 TMEM132AQ24JP5 1023 aa18.14■□□□□ 0.49
SHKBP1-205ENST00000594973 ADAT2Q7Z6V5 191 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms