RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TTPALQ9BTX7 342 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 MRPL17Q9NRX2 175 aaKnown RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 ARMCX3Q9UH62 379 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 TSC2P49815 1807 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 KPNA7A9QM74 516 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 SYN3O14994 580 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 PER2O15055 1255 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 LETM1O95202 739 aaPredicted RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 VNN1O95497 513 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 CNPP09543 421 aaKnown RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 PAX3P23760 479 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 GTF2H1P32780 548 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM4-216ENST00000592822 PNPLA4P41247 253 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 GCLMP48507 274 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 NRIP1P48552 1158 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 MARSP56192 900 aaKnown RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 HYAL1Q12794 435 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 BIRC3Q13489 604 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 BMS1Q14692 1282 aaKnown RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 ZACNQ401N2 412 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 SV2CQ496J9 727 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 CCDC40Q4G0X9 1142 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 KIAA1841Q6NSI8 718 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 DSTYKQ6XUX3 929 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 USP37Q86T82 979 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 RBM23Q86U06 439 aaKnown RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 LNX1Q8TBB1 728 aaPredicted RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 PIK3R5Q8WYR1 880 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 SLC35C1Q96A29 364 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 HPDLQ96IR7 371 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 SENP8Q96LD8 212 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 ZNF560Q96MR9 790 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 KLHL5Q96PQ7 755 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 FUCA2Q9BTY2 467 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 XYLT2Q9H1B5 865 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 DNAJC25Q9H1X3 360 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 TLE6Q9H808 572 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 MMRN2Q9H8L6 949 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 RXFP1Q9HBX9 757 aa10.71□□□□□ -0.69
TPM4-216ENST00000592822 METTL14Q9HCE5 456 aaKnown RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 TIMM13Q9Y5L4 95 aaPredicted RBP10.71□□□□□ -0.69
TPM4-216ENST00000592822 PLXNA3P51805 1871 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 SYCE3A1L190 88 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 CYB561D2O14569 222 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 TEX28O15482 410 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 CLASP2O75122 1294 aaKnown RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 PHACTR2O75167 634 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 FGFR1OPO95684 399 aaKnown RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 GNA14O95837 355 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 RPL17P18621 184 aaKnown RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 CA8P35219 290 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 MYL6P60660 151 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 NCOA4Q13772 614 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 MRPL58Q14197 206 aaKnown RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 COL19A1Q14993 1142 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 PSMD5Q16401 504 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 DUSP6Q16828 381 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 ZSCAN23Q3MJ62 389 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 DCAF17Q5H9S7 520 aaPredicted RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 VARS2Q5ST30 1063 aaKnown RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 RSPO2Q6UXX9 243 aaPredicted RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 TRIM59Q8IWR1 403 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 MAFAQ8NHW3 353 aaPredicted RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 ENOX1Q8TC92 643 aaKnown RBP10.7□□□□□ -0.7
TPM4-216ENST00000592822 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 ELMO3Q96BJ8 720 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 THAP9Q9H5L6 903 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 TMEM8AQ9HCN3 771 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 GDAP2Q9NXN4 497 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 SSX2IPQ9Y2D8 614 aa10.7□□□□□ -0.7
TPM4-216ENST00000592822 LINC01565O15544 149 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 ADAM12O43184 909 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 TBC1D4O60343 1298 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 STX10O60499 249 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 LRRN2O75325 713 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 OAZ2O95190 189 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 STAU1O95793 577 aaKnown RBP10.69□□□□□ -0.7
TPM4-216ENST00000592822 HLA-DRAP01903 254 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 CYP11A1P05108 521 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 CCDC192P0DO97 292 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 ODC1P11926 461 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 TYMPP19971 482 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 ATICP31939 592 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 RBM10P98175 930 aaKnown RBP10.69□□□□□ -0.7
TPM4-216ENST00000592822 MYO1EQ12965 1108 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 TRPC3Q13507 836 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 KCNC3Q14003 757 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
TPM4-216ENST00000592822 ANO6Q4KMQ2 910 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 CBWD6Q4V339 395 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 CBWD3Q5JTY5 395 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 CBWD5Q5RIA9 395 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 TCERG1LQ5VWI1 586 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 WSCD1Q658N2 575 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 PDXDC1Q6P996 788 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 ANKS3Q6ZW76 656 aa10.69□□□□□ -0.7
TPM4-216ENST00000592822 LIMS2Q7Z4I7 341 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms