RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
BRCA1-227ENST00000591849 RHOBTB3O94955 611 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 C1RP00736 705 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 DLATP10515 647 aaKnown RBP10.88□□□□□ -0.67
BRCA1-227ENST00000591849 CPB1P15086 417 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 TNNI1P19237 187 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 SP100P23497 879 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-227ENST00000591849 HOXD13P35453 343 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 PNPLA4P41247 253 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 LILRA4P59901 499 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 RBP5P82980 135 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 BFSP1Q12934 665 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 PNOCQ13519 176 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 RAB33AQ14088 237 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 SNRNP35Q16560 246 aaKnown RBP10.88□□□□□ -0.67
BRCA1-227ENST00000591849 DUOXA2Q1HG44 320 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 BMT2Q1RMZ1 405 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 SV2CQ496J9 727 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 CCDC149Q6ZUS6 474 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 GPR149Q86SP6 731 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 CBWD2Q8IUF1 395 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 EFCAB13Q8IY85 973 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 THEM5Q8N1Q8 247 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 SMG7Q92540 1137 aaKnown RBP10.88□□□□□ -0.67
BRCA1-227ENST00000591849 SMARCE1Q969G3 411 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 POLIQ9UNA4 740 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 MAPK8IP1Q9UQF2 711 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 NR2E1Q9Y466 385 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 MYH15Q9Y2K3 1946 aa10.88□□□□□ -0.67
BRCA1-227ENST00000591849 ANO9A1A5B4 782 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 M0QZQ0 153 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 PIRO00625 290 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 PDXKO00764 312 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 PRRG1O14668 218 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 PPEF2O14830 753 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ADAM12O43184 909 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 PHACTR2O75167 634 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 XYLBO75191 536 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ZMYND10O75800 440 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ITGB3P05106 788 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 C8AP07357 584 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 TYMPP19971 482 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 RPL13P26373 211 aaKnown RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ZP2Q05996 745 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 MYO1EQ12965 1108 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 KCNB1Q14721 858 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 TMEM31Q5JXX7 168 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 CEP135Q66GS9 1140 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 OVOS1Q6IE37 1185 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 LILRA6Q6PI73 481 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 CYP26C1Q6V0L0 522 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 C15orf39Q6ZRI6 1047 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 KIAA0895Q8NCT3 520 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 SUSD6Q92537 303 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ACSF2Q96CM8 615 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 OXCT2Q9BYC2 517 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 GTPBP4Q9BZE4 634 aaKnown RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 CYP4F11Q9HBI6 524 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ZDHHC7Q9NXF8 308 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 FBXL5Q9UKA1 691 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 ITGA11Q9UKX5 1188 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 DSEQ9UL01 958 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 FRMD4BQ9Y2L6 1034 aa10.87□□□□□ -0.67
BRCA1-227ENST00000591849 TDRD15B5MCY1 1934 aaKnown RBP10.87□□□□□ -0.67
BRCA1-227ENST00000591849 OR6C75A6NL08 312 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 KPNA7A9QM74 516 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 HUS1O60921 280 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 RFPL2O75678 378 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 LRG1P02750 347 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 NR3C1P04150 777 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 HNRNPA1P09651 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
BRCA1-227ENST00000591849 ROR1Q01973 937 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 CYP24A1Q07973 514 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 TRPC3Q13507 836 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 STIM1Q13586 685 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 MRPL58Q14197 206 aaKnown RBP10.86□□□□□ -0.67
BRCA1-227ENST00000591849 PSMD6Q15008 389 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 TPGS2Q68CL5 300 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 WDR49Q8IV35 697 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 C12orf56Q8IXR9 622 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 GUF1Q8N442 669 aaKnown RBP10.86□□□□□ -0.67
BRCA1-227ENST00000591849 ENGASEQ8NFI3 743 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 CMASQ8NFW8 434 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-227ENST00000591849 ZNF461Q8TAF7 563 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 SLC7A14Q8TBB6 771 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 GSDMAQ96QA5 445 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 CGRRF1Q99675 332 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 TSG101Q99816 390 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 PRKD2Q9BZL6 878 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 MTMR12Q9C0I1 747 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 POMKQ9H5K3 350 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 INTS13Q9NVM9 706 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 RAPGEFL1Q9UHV5 662 aa10.86□□□□□ -0.67
BRCA1-227ENST00000591849 CDH22Q9UJ99 828 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms