RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 ERP27Q96DN0 273 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 MYLK2Q9H1R3 596 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 PNMA6FA0A0J9YX94 578 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 FUOMA2VDF0 154 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 STRNO43815 780 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 MYBP10242 640 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 XRCC5P13010 732 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 PHBP35232 272 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 CRY1Q16526 586 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 ZNF423Q2M1K9 1284 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 IZUMO2Q6UXV1 221 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 ECHDC2Q86YB7 292 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 RIN3Q8TB24 985 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 HAS1Q92839 578 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 KIAA1683Q9H0B3 1180 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 DOT1LQ8TEK3 1739 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 TM4SF1P30408 202 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 RASSF2P50749 326 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 DSG1Q02413 1049 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 TMTC4Q5T4D3 741 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 KLHDC10Q6PID8 442 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 NLRP9Q7RTR0 991 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 OSTM1Q86WC4 334 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 SEPT11Q9NVA2 429 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 PPP1R9AQ9ULJ8 1098 aa12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-217ENST00000591595 MAP3K10Q02779 954 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 PRKG1Q13976 671 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 SUZ12Q15022 739 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 TGFBIQ15582 683 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 CNGA2Q16280 664 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 RFWD3Q6PCD5 774 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ARHGEF2Q92974 986 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 PGM2Q96G03 612 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 COX4I2Q96KJ9 171 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 STX18Q9P2W9 335 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 COQ6Q9Y2Z9 468 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 NUMBLQ9Y6R0 609 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 PGRMC1O00264 195 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 RGS16O15492 202 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 UCHL3P15374 230 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 POLR2EP19388 210 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 LRRC14Q15048 493 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 CCDC110Q8TBZ0 833 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 STMN2Q93045 179 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 LOC105371267A0A1B0GV96 52 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ANKRD34BA5PLL1 514 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 PSMG1O95456 288 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 PRKACBP22694 351 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 GPC3P51654 580 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 ADAT2Q7Z6V5 191 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 KIAA1257Q9ULG3 409 aa12.9□□□□□ -0.34
SMARCA4-217ENST00000591595 TTLL1O95922 423 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 GTF2IP78347 998 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 PRR16Q569H4 304 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 MGARPQ8TDB4 240 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 MORC4Q8TE76 937 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 NEURL2Q9BR09 285 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 AIPL1Q9NZN9 384 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 NOC2LQ9Y3T9 749 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 SNX9Q9Y5X1 595 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 ABCA3Q99758 1704 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 CLIC2O15247 247 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 XPOTO43592 962 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 EDIL3O43854 480 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 IL23RQ5VWK5 629 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms