RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RPN1P04843 607 aaKnown RBP24.18■■□□□ 1.46
MBD3-208ENST00000590830 MYL1P05976 194 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 C8AP07357 584 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 DPYDQ12882 1025 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 KNOP1Q1ED39 458 aaKnown RBP24.18■■□□□ 1.46
MBD3-208ENST00000590830 CTXN3Q4LDR2 81 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 CYP26C1Q6V0L0 522 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 DSTYKQ6XUX3 929 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 NT5DC4Q86YG4 428 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 CXorf38Q8TB03 319 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 SENP8Q96LD8 212 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 EXOC1Q9NV70 894 aa24.18■■□□□ 1.46
MBD3-208ENST00000590830 ARPP19P56211 112 aa24.17■■□□□ 1.46
MBD3-208ENST00000590830 TFAMQ00059 246 aaKnown RBP24.17■■□□□ 1.46
MBD3-208ENST00000590830 PSMD2Q13200 908 aa24.17■■□□□ 1.46
MBD3-208ENST00000590830 FMR1NBQ8N0W7 255 aaPredicted RBP24.17■■□□□ 1.46
MBD3-208ENST00000590830 C1orf127Q8N9H9 656 aa24.17■■□□□ 1.46
MBD3-208ENST00000590830 ZNF461Q8TAF7 563 aa24.17■■□□□ 1.46
MBD3-208ENST00000590830 SLC7A14Q8TBB6 771 aa24.17■■□□□ 1.46
MBD3-208ENST00000590830 WDR6Q9NNW5 1121 aaKnown RBP24.17■■□□□ 1.46
MBD3-208ENST00000590830 NR2E1Q9Y466 385 aa24.17■■□□□ 1.46
MBD3-208ENST00000590830 PTPRJQ12913 1337 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 ZNF233A6NK53 670 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 N4BP1O75113 896 aaKnown RBP24.16■■□□□ 1.46
MBD3-208ENST00000590830 ALADP13716 330 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 CYP2J2P51589 502 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 SNRPFP62306 86 aaKnown RBP24.16■■□□□ 1.46
MBD3-208ENST00000590830 YWHAHQ04917 246 aaPredicted RBP24.16■■□□□ 1.46
MBD3-208ENST00000590830 ZNF280DQ6N043 979 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 RDH13Q8NBN7 331 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 USTQ9Y2C2 406 aa24.16■■□□□ 1.46
MBD3-208ENST00000590830 MTCL1Q9Y4B5 1905 aaKnown RBP24.16■■□□□ 1.46
MBD3-208ENST00000590830 SEC24AO95486 1093 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 TYMPP19971 482 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 SNW1Q13573 536 aaKnown RBP24.15■■□□□ 1.46
MBD3-208ENST00000590830 UVSSAQ2YD98 709 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 PPM1LQ5SGD2 360 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 LIN9Q5TKA1 542 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 LMBRD2Q68DH5 695 aaPredicted RBP24.15■■□□□ 1.46
MBD3-208ENST00000590830 CCDC149Q6ZUS6 474 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 ENGASEQ8NFI3 743 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 OR5B17Q8NGF7 314 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 PIDD1Q9HB75 910 aa24.15■■□□□ 1.46
MBD3-208ENST00000590830 C2orf16Q68DN1 1984 aa24.14■■□□□ 1.46
MBD3-208ENST00000590830 FAM86C2PA6NEL3 165 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 CCL16O15467 120 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 HNRNPA1P09651 372 aaKnown RBP eCLIP24.14■■□□□ 1.45
MBD3-208ENST00000590830 PAX3P23760 479 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 TAF6P49848 677 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 HS2ST1Q7LGA3 356 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 C12orf56Q8IXR9 622 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 ZDHHC14Q8IZN3 488 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 CACTINQ8WUQ7 758 aaKnown RBP24.14■■□□□ 1.45
MBD3-208ENST00000590830 GZF1Q9H116 711 aaPredicted RBP24.14■■□□□ 1.45
MBD3-208ENST00000590830 KCTD10Q9H3F6 313 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 KIAA1586Q9HCI6 787 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 INTS13Q9NVM9 706 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 LIMD1Q9UGP4 676 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 SIX4Q9UIU6 781 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 AGAP1Q9UPQ3 857 aa24.14■■□□□ 1.45
MBD3-208ENST00000590830 CLUHO75153 1309 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 CYB561D2O14569 222 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 RHOBTB3O94955 611 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 VNN2O95498 520 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 ITGB3P05106 788 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 CYP11A1P05108 521 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 OR4Q2P0C623 313 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 ATF2P15336 505 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 POLR2BP30876 1174 aaKnown RBP24.13■■□□□ 1.45
MBD3-208ENST00000590830 HOXA9P31269 272 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 NTHL1P78549 312 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 SNRNP35Q16560 246 aaKnown RBP24.13■■□□□ 1.45
MBD3-208ENST00000590830 OVOS1Q6IE37 1185 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 RNF19BQ6ZMZ0 732 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 GRASPQ7Z6J2 395 aaPredicted RBP24.13■■□□□ 1.45
MBD3-208ENST00000590830 USP37Q86T82 979 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 TDRD5Q8NAT2 981 aaKnown RBP24.13■■□□□ 1.45
MBD3-208ENST00000590830 XXYLT1Q8NBI6 393 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 TMEM209Q96SK2 561 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 RTP3Q9BQQ7 232 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 C1QTNF1Q9BXJ1 281 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 MTMR12Q9C0I1 747 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 DMAC2Q9NW81 257 aa24.13■■□□□ 1.45
MBD3-208ENST00000590830 CIZ1Q9ULV3 898 aaPredicted RBP24.13■■□□□ 1.45
MBD3-208ENST00000590830 SCN1AP35498 2009 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 ODC1P11926 461 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 TPGS2Q68CL5 300 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 TCEAL8Q8IYN2 117 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 CSGALNACT2Q8N6G5 542 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 MYADMQ96S97 322 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 CGNQ9P2M7 1197 aaKnown RBP24.12■■□□□ 1.45
MBD3-208ENST00000590830 TRIOO75962 3097 aa24.12■■□□□ 1.45
MBD3-208ENST00000590830 ARHGEF37A1IGU5 675 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 GOLGA6L4A6NEF3 574 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 KPNA7A9QM74 516 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 GPR37L1O60883 481 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 ASGR2P07307 311 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 POU2F2P09086 479 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 CYP24A1Q07973 514 aa24.11■■□□□ 1.45
MBD3-208ENST00000590830 WSCD1Q658N2 575 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms