RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 RIBC1Q8N443 379 aaPredicted RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 MCUR1Q96AQ8 359 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 TMEM117Q9H0C3 514 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 HAUS5O94927 633 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 AMPD1P23109 780 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 GSTT1P30711 240 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 MAN1A1P33908 653 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 NR1H3Q13133 447 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 THOC5Q13769 683 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 ZCCHC9Q8N567 271 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 RPGRQ92834 1020 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 GBP5Q96PP8 586 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 TAS2R1Q9NYW7 299 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 SMG5Q9UPR3 1016 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 MAGEA13PA6NCF6 341 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 ZBED4O75132 1171 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 UFL1O94874 794 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 CYP1A1P04798 512 aaPredicted RBP16.68■□□□□ 0.26
MBD1-222ENST00000590208 GSTA2P09210 222 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 SERPINB3P29508 390 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 ADSSP30520 456 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 CETN2P41208 172 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 CPA2P48052 419 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 UBXN2AP68543 259 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 GPSM2P81274 684 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 WDR72Q3MJ13 1102 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 FYB2Q5VWT5 728 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 RELL1Q8IUW5 271 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 PTPRN2Q92932 1015 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 NRAPQ86VF7 1730 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 K7ENM7 598 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 ABHD2P08910 425 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 MXI1P50539 228 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 NOP14P78316 857 aaKnown RBP16.68■□□□□ 0.26
MBD1-222ENST00000590208 KLF1Q13351 362 aaPredicted RBP16.68■□□□□ 0.26
MBD1-222ENST00000590208 EFTUD2Q15029 972 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 37.3
MBD1-222ENST00000590208 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 LRRC6Q86X45 466 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 MAIP1Q8WWC4 291 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 RBM41Q96IZ5 413 aaKnown RBP16.68■□□□□ 0.26
MBD1-222ENST00000590208 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 TIPINQ9BVW5 301 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 KLHL11Q9NVR0 708 aa16.68■□□□□ 0.26
MBD1-222ENST00000590208 SMCHD1A6NHR9 2005 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 F5H6K3 240 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 GAKO14976 1311 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 CD58P19256 250 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 KLRC2P26717 231 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 AP1B1Q10567 949 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 MTM1Q13496 603 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 ZBED8Q8IZ13 594 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 DAW1Q8N136 415 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 STMN2Q93045 179 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 FAM84AQ96KN4 292 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 SYNCQ9H7C4 482 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 ANKFY1Q9P2R3 1169 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 ACAD10Q6JQN1 1059 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 STXBP4Q6ZWJ1 553 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 SLC9A9Q8IVB4 645 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 PPFIBP2Q8ND30 876 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 CPA5Q8WXQ8 436 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 SHC3Q92529 594 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 NSL1Q96IY1 281 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
MBD1-222ENST00000590208 ARMCX1Q9P291 453 aa16.67■□□□□ 0.26
MBD1-222ENST00000590208 STX18Q9P2W9 335 aaKnown RBP16.67■□□□□ 0.26
MBD1-222ENST00000590208 ZNFX1Q9P2E3 1918 aaKnown RBP16.67■□□□□ 0.26
MBD1-222ENST00000590208 GOLGA8SH3BPF8 625 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 GOLGA8MH3BSY2 632 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 PIK3CDO00329 1044 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 MAP3K7O43318 606 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 TROVE2P10155 538 aaKnown RBP eCLIP16.66■□□□□ 0.26
MBD1-222ENST00000590208 TAS2R40P59535 323 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 PPP2R5CQ13362 524 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 SLFN13Q68D06 897 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 ANKMY2Q8IV38 441 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 PDCD7Q8N8D1 485 aaKnown RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 DDX1Q92499 740 aaKnown RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 FAM163AQ96GL9 167 aaPredicted RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 SLC17A7Q9P2U7 560 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 EEF2P13639 858 aaKnown RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 ZBTB16Q05516 673 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 CCNG2Q16589 344 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 ZNF276Q8N554 614 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 SH2D3AQ9BRG2 576 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
MBD1-222ENST00000590208 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
MBD1-222ENST00000590208 IGLV3-22A0A075B6J6 115 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms