RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZCWPW2Q504Y3 356 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 GNASQ5JWF2 1037 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 ARHGEF18Q6ZSZ5 1173 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 CENPUQ71F23 418 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 ACOT1Q86TX2 421 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 RBM15Q96T37 977 aaKnown RBP eCLIP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 ISCUQ9H1K1 167 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 DIS3Q9Y2L1 958 aaKnown RBP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 IQCA1LA6NCM1 817 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 GTF2A1P52655 376 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 E2F5Q15329 346 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 DCLK2Q8N568 766 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 EPS8L1Q8TE68 723 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 C17orf75Q9HAS0 396 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 GPATCH2LQ9NWQ4 482 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 AJAP1Q9UKB5 411 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 POLIQ9UNA4 740 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 H3BRB1 525 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 PIAS1O75925 651 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 GLRA2P23416 452 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ERFP50548 548 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ITGA8P53708 1063 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ZBTB41Q5SVQ8 909 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 GPC2Q8N158 579 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 C4orf33Q8N1A6 199 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 PPM1NQ8N819 430 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 BEST2Q8NFU1 509 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ZNF606Q8WXB4 792 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 CLEC4DQ8WXI8 215 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 AGAP3Q96P47 875 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 SEMA4AQ9H3S1 761 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 TUT1Q9H6E5 874 aaKnown RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 KCND1Q9NSA2 647 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 OPLAHO14841 1288 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 P4HA2O15460 535 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 CPP00450 1065 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 MT-ND3P03897 115 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 RFC5P40937 340 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 PLCB4Q15147 1175 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 HYIQ5T013 277 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 LGSNQ5TDP6 509 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 TTC17Q96AE7 1141 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 CFAP57Q96MR6 1250 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 TTYH3Q9C0H2 523 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 METTL5Q9NRN9 209 aaKnown RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 SAE1Q9UBE0 346 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 G3BP2Q9UN86 482 aaKnown RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 DOT1LQ8TEK3 1739 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 GTPBP10A4D1E9 387 aaKnown RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 FAM187AA6NFU0 413 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 TBC1D12O60347 775 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 GBP1P32455 592 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 EIF3BP55884 814 aaKnown RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 TNFAIP2Q03169 654 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ZNF449Q6P9G9 518 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 FEZF2Q8TBJ5 459 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 RAB21Q9UL25 225 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 DUOX1Q9NRD9 1551 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 B4GALT5O43286 388 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 MOCS2O96007 188 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 APRTP07741 180 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 COILP38432 576 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 MAPK7Q13164 816 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 CEP128Q6ZU80 1094 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ABI1Q8IZP0 508 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 RDM1Q8NG50 284 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ATXN7L3BQ96GX2 97 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 ASNSD1Q9NWL6 643 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 DCTN4Q9UJW0 460 aa15.41■□□□□ 0.06
RETREG3-208ENST00000589797 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-208ENST00000589797 PPP1R37O75864 691 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 STAG3L1P0CL83 205 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 PRLRP16471 622 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 GARTP22102 1010 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 AKAP5P24588 427 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 ADCY2Q08462 1091 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 SPIRE1Q08AE8 756 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 DHX34Q14147 1143 aaKnown RBP15.4■□□□□ 0.06
RETREG3-208ENST00000589797 HIBCHQ6NVY1 386 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-208ENST00000589797 FOXR1Q6PIV2 292 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 CCDC125Q86Z20 511 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 GMNCA6NCL1 334 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 EIF3EP60228 445 aaKnown RBP15.4■□□□□ 0.06
RETREG3-208ENST00000589797 IL9RQ01113 521 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 DRP2Q13474 957 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 CCDC14Q49A88 953 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 MAP4K3Q8IVH8 894 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 SNF8Q96H20 258 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 SLC13A1Q9BZW2 595 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 TBC1D1Q86TI0 1168 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-208ENST00000589797 EPS8L3Q8TE67 593 aaKnown RBP15.4■□□□□ 0.06
RETREG3-208ENST00000589797 STRIP2Q9ULQ0 834 aa15.4■□□□□ 0.06
RETREG3-208ENST00000589797 PDHXO00330 501 aa15.39■□□□□ 0.05
RETREG3-208ENST00000589797 BYSLQ13895 437 aaKnown RBP15.39■□□□□ 0.05
RETREG3-208ENST00000589797 TRIM72Q6ZMU5 477 aa15.39■□□□□ 0.05
RETREG3-208ENST00000589797 NLRP14Q86W24 1093 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms