RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TMC7Q7Z402 723 aa22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 POP1Q99575 1024 aaKnown RBP22.92■■□□□ 1.26
R3HDM4-204ENST00000589428 DLATP10515 647 aaKnown RBP22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 LRPAP1P30533 357 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 PPP3CAQ08209 521 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 PDE12Q6L8Q7 609 aaKnown RBP22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 CACTINQ8WUQ7 758 aaKnown RBP22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 NGRNQ9NPE2 291 aaKnown RBP22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 STXBP5LQ9Y2K9 1186 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 PTPRJQ12913 1337 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 SOD2P04179 222 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 TMEM191BP0C7N4 346 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 CA8P35219 290 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 FMO5P49326 533 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 GUCY2FP51841 1108 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 CLDN10P78369 228 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 ELAVL2Q12926 359 aaKnown RBP22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 CBWD6Q4V339 395 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 CBWD3Q5JTY5 395 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 CBWD5Q5RIA9 395 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 PLPP4Q5VZY2 271 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 USP37Q86T82 979 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 PPP2R3CQ969Q6 453 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 FAM84AQ96KN4 292 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 HERC2P3Q9BVR0 1158 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 VN1R3Q9BXE9 311 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 ZBP1Q9H171 429 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 NSUN3Q9H649 340 aaKnown RBP22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 MMRN2Q9H8L6 949 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 DPP3Q9NY33 737 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 NUB1Q9Y5A7 615 aa22.91■■□□□ 1.26
R3HDM4-204ENST00000589428 A0A1W2PQC6 194 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 IRS1P35568 1242 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 ERVFC1P60507 584 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 SMC1AQ14683 1233 aaKnown RBP22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 SYCP1Q15431 976 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 WDR49Q8IV35 697 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 C3orf58Q8NDZ4 430 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 ANKRD36BP1Q96IX9 119 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 ERGIC2Q96RQ1 377 aa22.9■■□□□ 1.26
R3HDM4-204ENST00000589428 PRRC2BQ5JSZ5 2229 aaKnown RBP22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 TRAPPC3O43617 180 aa22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 URODP06132 367 aa22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 GCLMP48507 274 aa22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 CCDC173Q0VFZ6 552 aa22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 TMC6Q7Z403 805 aa22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 CGRRF1Q99675 332 aa22.89■■□□□ 1.26
R3HDM4-204ENST00000589428 FSCN2O14926 492 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 CTSAP10619 480 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 TNNI1P19237 187 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 KLK7P49862 253 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 MYL7Q01449 175 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 USP41Q3LFD5 358 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 LMBRD2Q68DH5 695 aaPredicted RBP22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 SPECC1LQ69YQ0 1117 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 KIAA1841Q6NSI8 718 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 RNF168Q8IYW5 571 aaPredicted RBP22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 SPC24Q8NBT2 197 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 PPP1R9BQ96SB3 815 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 GPR62Q9BZJ7 368 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 MTMR12Q9C0I1 747 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 SIK3Q9Y2K2 1263 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 STX10O60499 249 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 TNNC2P02585 160 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 GLUD2P49448 558 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 MXI1P50539 228 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 C9orf57Q5W0N0 161 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 DRC7Q8IY82 874 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 TMEM130Q8N3G9 435 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 ZNF516Q92618 1163 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 CRACR2AQ9BSW2 395 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 PCDHGC5Q9Y5F6 944 aa22.88■■□□□ 1.25
R3HDM4-204ENST00000589428 ATG2AQ2TAZ0 1938 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 GTPBP10A4D1E9 387 aaKnown RBP22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 EFEMP2O95967 443 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 GTF2H1P32780 548 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 DUOXA2Q1HG44 320 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 FAM171A1Q5VUB5 890 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 MAFAQ8NHW3 353 aaPredicted RBP22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 TMEM8AQ9HCN3 771 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 MRPL17Q9NRX2 175 aaKnown RBP22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 ITGA11Q9UKX5 1188 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 SSX2IPQ9Y2D8 614 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 R3HCC1Q9Y3T6 440 aaKnown RBP22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 ITIH6Q6UXX5 1313 aa22.87■■□□□ 1.25
R3HDM4-204ENST00000589428 BRCC3P46736 316 aa22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 KCNMA1Q12791 1236 aa22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 CCDC85BQ15834 202 aaPredicted RBP22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 AUTS2Q8WXX7 1259 aa22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 PPM1EQ8WY54 764 aa22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 ZNF560Q96MR9 790 aa22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 GCNT4Q9P109 453 aa22.86■■□□□ 1.25
R3HDM4-204ENST00000589428 ANO9A1A5B4 782 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 N4BP1O75113 896 aaKnown RBP22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 CXCL14O95715 111 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 ITGB3P05106 788 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 IGFBP6P24592 240 aaPredicted RBP22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 PTPN14Q15678 1187 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms