RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 SGSM1Q2NKQ1 1148 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 TIGD5Q53EQ6 642 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 DSTYKQ6XUX3 929 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 CCDC150Q8NCX0 1101 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 GDPD5Q8WTR4 605 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 SEMA4DQ92854 862 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 SUSD3Q96L08 255 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 IMPG2Q9BZV3 1241 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 VPS16Q9H269 839 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 TTYH1Q9H313 450 aaPredicted RBP16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 STK39Q9UEW8 545 aa16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 PUF60Q9UHX1 559 aaKnown RBP16.64■□□□□ 0.25
RPRD1A-208ENST00000589050 RFXAPO00287 272 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 GRM6O15303 877 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 PMM2O15305 246 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 P4HA2O15460 535 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 CSPG5O95196 566 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 EFEMP2O95967 443 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 UBE3AQ05086 875 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 TAS1R1Q7RTX1 841 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 VPS52Q8N1B4 723 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 POF1BQ8WVV4 589 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 TAF4BQ92750 862 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 ELMO3Q96BJ8 720 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 SENP8Q96LD8 212 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 HERC2P3Q9BVR0 1158 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 XYLT2Q9H1B5 865 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 SNX9Q9Y5X1 595 aa16.63■□□□□ 0.25
RPRD1A-208ENST00000589050 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 CYB561D2O14569 222 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 LRRN2O75325 713 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 STAU1O95793 577 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 ASS1P00966 412 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 SOD2P04179 222 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 ODC1P11926 461 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 TKTP29401 623 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 TNNC1P63316 161 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 USP41Q3LFD5 358 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 WDR72Q3MJ13 1102 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 WDR44Q5JSH3 913 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 APTXQ7Z2E3 356 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 CEP57Q86XR8 500 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 RNF168Q8IYW5 571 aaPredicted RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 B3GALT6Q96L58 329 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 VRTNQ9H8Y1 702 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 GDAP2Q9NXN4 497 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 GCNT4Q9P109 453 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 PCDHB8Q9UN66 801 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 TRIP11Q15643 1979 aa16.62■□□□□ 0.25
RPRD1A-208ENST00000589050 M0QZQ0 153 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 SERPINC1P01008 464 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 DNAJB1P25685 340 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 GRIN2CQ14957 1233 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 ZNF667Q5HYK9 610 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 SPOPLQ6IQ16 392 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 KIAA1841Q6NSI8 718 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 GBP6Q6ZN66 633 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 EHBP1Q8NDI1 1231 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 FAM161BQ96MY7 647 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 MMS19Q96T76 1030 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 CRACR2AQ9BSW2 395 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 TTPALQ9BTX7 342 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 INTS2Q9H0H0 1204 aaKnown RBP16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 ZBP1Q9H171 429 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 RBSNQ9H1K0 784 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 PRDM12Q9H4Q4 367 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 ENTPD7Q9NQZ7 604 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 TLR9Q9NR96 1032 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
RPRD1A-208ENST00000589050 ARHGEF37A1IGU5 675 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 GTPBP10A4D1E9 387 aaKnown RBP16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 LGALS16A8MUM7 142 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 SYN3O14994 580 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 HUS1O60921 280 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 URODP06132 367 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 P4HA1P13674 534 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 FGFR3P22607 806 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 CA8P35219 290 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 GLUD2P49448 558 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 FANCCQ00597 558 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 BMS1Q14692 1282 aaKnown RBP16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 RTP2Q5QGT7 225 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 FKBP15Q5T1M5 1219 aa16.6■□□□□ 0.25
RPRD1A-208ENST00000589050 GPR153Q6NV75 609 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms