RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CCDC137Q6PK04 289 aaKnown RBP16.26■□□□□ 0.19
MBD1-217ENST00000588937 C12orf50Q8NA57 414 aaPredicted RBP16.26■□□□□ 0.19
MBD1-217ENST00000588937 ZNF606Q8WXB4 792 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 PIK3R5Q8WYR1 880 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 FMO2Q99518 471 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 TRIM51Q9BSJ1 452 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 ZNF518BQ9C0D4 1074 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 DPH5Q9H2P9 285 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 PLAAQ9Y263 795 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 UMODL1Q5DID0 1318 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 PROSCO94903 275 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 CALB1P05937 261 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 HOXC6P09630 235 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 INSRRP14616 1297 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 HSD17B3P37058 310 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 PLEKHA7Q6IQ23 1121 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
MBD1-217ENST00000588937 THNSL1Q8IYQ7 743 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 C11orf70Q9BRQ4 267 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 FAM129AQ9BZQ8 928 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 NEUROG2Q9H2A3 272 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 RNPEPQ9H4A4 650 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
MBD1-217ENST00000588937 PARVAQ9NVD7 372 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 MORF4L1Q9UBU8 362 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 PASKQ96RG2 1323 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 CCL15-CCL14A0A0B4J2E2 113 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 FSCN2O14926 492 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 PSTPIP1O43586 416 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 MAN1A1P33908 653 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 COILP38432 576 aaPredicted RBP16.25■□□□□ 0.19
MBD1-217ENST00000588937 PTGIRP43119 386 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 CCL15Q16663 113 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 PASD1Q8IV76 773 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 C18orf8Q96DM3 657 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 LRRC19Q9H756 370 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 CISHQ9NSE2 258 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.25■□□□□ 0.19
MBD1-217ENST00000588937 CALCOCO1Q9P1Z2 691 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 CEP83Q9Y592 693 aa16.25■□□□□ 0.19
MBD1-217ENST00000588937 HMGB1P1B2RPK0 211 aaPredicted RBP16.24■□□□□ 0.19
MBD1-217ENST00000588937 ZEB2O60315 1214 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 PPFIA4O75335 1185 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 KRT14P02533 472 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 MCF2P10911 925 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 IGBP1P78318 339 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 MAMLD1Q13495 774 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 TTMPQ5BVD1 217 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 TMEM63BQ5T3F8 832 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 RUFY4Q6ZNE9 571 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 TMC3Q7Z5M5 1100 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 RHOT1Q8IXI2 618 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 CCDC105Q8IYK2 499 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 TMEM35BQ8NCS4 154 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 ARL8AQ96BM9 186 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 TRIM31Q9BZY9 425 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 CDT1Q9H211 546 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 HOMER3Q9NSC5 361 aa16.24■□□□□ 0.19
MBD1-217ENST00000588937 CWC15Q9P013 229 aaKnown RBP16.24■□□□□ 0.19
MBD1-217ENST00000588937 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
MBD1-217ENST00000588937 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 IVLP07476 585 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 GJB1P08034 283 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 RARAP10276 462 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 MMP8P22894 467 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 TAP1Q03518 808 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 DHX9Q08211 1270 aaKnown RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 MAMDC4Q6UXC1 1216 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 MMS22LQ6ZRQ5 1243 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 UBLCP1Q8WVY7 318 aaPredicted RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 IFT122Q9HBG6 1241 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 MTRF1LQ9UGC7 380 aaKnown RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 IP6K2Q9UHH9 426 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 TLR3O15455 904 aaKnown RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 B4GALT5O43286 388 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 SHOX2O60902 331 aaPredicted RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 PPFIA2O75334 1257 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 MYZAPP0CAP1 466 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 EIF4BP23588 611 aaKnown RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 CETN2P41208 172 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 SKOR1P84550 965 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 SIX1Q15475 284 aaPredicted RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 ZSCAN26Q16670 478 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 SGO2Q562F6 1265 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 CEP85LQ5SZL2 805 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 SYDE1Q6ZW31 735 aaPredicted RBP16.23■□□□□ 0.19
MBD1-217ENST00000588937 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 CPNE8Q86YQ8 564 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 LINC01465Q8N7H1 131 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 AFG1LQ8WV93 481 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 SLCO2A1Q92959 643 aa16.23■□□□□ 0.19
MBD1-217ENST00000588937 ATP6V1G3Q96LB4 118 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms