RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TCF25Q9BQ70 676 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 HERC2P3Q9BVR0 1158 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 GPR62Q9BZJ7 368 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 DNAI2Q9GZS0 605 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 PRDM12Q9H4Q4 367 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 FAM124BQ9H5Z6 455 aaPredicted RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 ALG13Q9NP73 1137 aaKnown RBP9.76□□□□□ -0.85
CIRBP-218ENST00000588344 RAB20Q9NX57 234 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 FNIP2Q9P278 1114 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 DPP7Q9UHL4 492 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 SIX4Q9UIU6 781 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 PCDHB8Q9UN66 801 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 COQ4Q9Y3A0 265 aa9.76□□□□□ -0.85
CIRBP-218ENST00000588344 KCNJ18B7U540 433 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 CYB561D2O14569 222 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 HUS1O60921 280 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 CST3P01034 146 aaPredicted RBP9.75□□□□□ -0.85
CIRBP-218ENST00000588344 CYP11A1P05108 521 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 GCLMP48507 274 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 GLUD2P49448 558 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 TNNC1P63316 161 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 YWHAHQ04917 246 aaPredicted RBP9.75□□□□□ -0.85
CIRBP-218ENST00000588344 PPP3CAQ08209 521 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 KCNJ12Q14500 433 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 C1orf220Q5T0J3 134 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 KIAA0319Q5VV43 1072 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 TDRD10Q5VZ19 366 aaKnown RBP9.75□□□□□ -0.85
CIRBP-218ENST00000588344 LMBRD2Q68DH5 695 aaPredicted RBP9.75□□□□□ -0.85
CIRBP-218ENST00000588344 ELMSAN1Q6PJG2 1045 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 CD300LGQ6UXG3 332 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 TMEM173Q86WV6 379 aaPredicted RBP9.75□□□□□ -0.85
CIRBP-218ENST00000588344 CEP57Q86XR8 500 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 IRF2BP1Q8IU81 584 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 THEM5Q8N1Q8 247 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 TTC39CQ8N584 583 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 TOP6BLQ8N6T0 577 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 FBXL13Q8NEE6 735 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 PIK3R5Q8WYR1 880 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 RABGGTAQ92696 567 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 SENP8Q96LD8 212 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 FAM81BQ96LP2 452 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 ZBP1Q9H171 429 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 NSUN3Q9H649 340 aaKnown RBP9.75□□□□□ -0.85
CIRBP-218ENST00000588344 RXFP1Q9HBX9 757 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 ENTPD7Q9NQZ7 604 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 MTMR10Q9NXD2 777 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 BACE2Q9Y5Z0 518 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 PTPRJQ12913 1337 aa9.75□□□□□ -0.85
CIRBP-218ENST00000588344 GTPBP10A4D1E9 387 aaKnown RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 EPOPA6NHQ4 379 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 OR6C75A6NL08 312 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 GOLGA6L19H0YKK7 550 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 FSCN2O14926 492 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 LILRB3O75022 631 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 OAZ2O95190 189 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 TRIM49P0CI25 452 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 TRIM49CP0CI26 452 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 TRIM21P19474 475 aaKnown RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 IGFBP4P22692 258 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 DNAJB1P25685 340 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 PIK3CAP42336 1068 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 LHX1P48742 406 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 FMO5P49326 533 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 GUCY2FP51841 1108 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF445P59923 1031 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 ERVFC1P60507 584 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 MRPL58Q14197 206 aaKnown RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 MAN2A1Q16706 1144 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF699Q32M78 642 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 WDR72Q3MJ13 1102 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 VWA3BQ502W6 1294 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF667Q5HYK9 610 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 CDKAL1Q5VV42 579 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 C11orf57Q6ZUT1 292 aaPredicted RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 RTL10Q7L3V2 364 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 SPRED2Q7Z698 418 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 C3orf58Q8NDZ4 430 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 HASPINQ8TF76 798 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 GDPD5Q8WTR4 605 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 BCL7CQ8WUZ0 217 aaPredicted RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 FAM161BQ96MY7 647 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 TUBGCP2Q9BSJ2 902 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 XYLT2Q9H1B5 865 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 TSPY26PQ9H489 355 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 TLE6Q9H808 572 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 SAMSN1Q9NSI8 373 aaKnown RBP9.74□□□□□ -0.85
CIRBP-218ENST00000588344 FANCLQ9NW38 375 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 CACNG4Q9UBN1 327 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 MAFFQ9ULX9 164 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 SNX9Q9Y5X1 595 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 MTCH2Q9Y6C9 303 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 CHD9Q3L8U1 2897 aa9.74□□□□□ -0.85
CIRBP-218ENST00000588344 C2orf71A6NGG8 1288 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 F8W810 466 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 RFXAPO00287 272 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms