RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ID4P47928 161 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 AARSP49588 968 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERCC1-206ENST00000588300 MCM2P49736 904 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 DHX8Q14562 1220 aaKnown RBP17.32■□□□□ 0.36
ERCC1-206ENST00000588300 ZBTB6Q15916 424 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 ZNF528Q3MIS6 628 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 ZNF852Q6ZMS4 543 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 USP37Q86T82 979 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 TMEM130Q8N3G9 435 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 MYCT1Q8N699 235 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 RASSF8Q8NHQ8 419 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 ASB16Q96NS5 453 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 TSPAN18Q96SJ8 248 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 BRD9Q9H8M2 597 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 RPF1Q9H9Y2 349 aaKnown RBP17.32■□□□□ 0.36
ERCC1-206ENST00000588300 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
ERCC1-206ENST00000588300 PARVGQ9HBI0 331 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 CEP72Q9P209 647 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 YIPF1Q9Y548 306 aa17.32■□□□□ 0.36
ERCC1-206ENST00000588300 TIMM13Q9Y5L4 95 aaPredicted RBP17.32■□□□□ 0.36
ERCC1-206ENST00000588300 COL4A2P08572 1712 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 LACTBL1A8MY62 500 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 KINO60870 393 aaKnown RBP17.31■□□□□ 0.36
ERCC1-206ENST00000588300 KRT18P05783 430 aaKnown RBP17.31■□□□□ 0.36
ERCC1-206ENST00000588300 MYL4P12829 197 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 ZNF131P52739 623 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 EPHA5P54756 1037 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 PLD1Q13393 1074 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 GRM2Q14416 872 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 ENOX2Q16206 610 aaKnown RBP17.31■□□□□ 0.36
ERCC1-206ENST00000588300 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
ERCC1-206ENST00000588300 DSTYKQ6XUX3 929 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 HS6ST3Q8IZP7 471 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 BEST2Q8NFU1 509 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 SMARCD2Q92925 531 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 CLDN23Q96B33 292 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 BORCS6Q96GS4 357 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 HINFPQ9BQA5 517 aa17.31■□□□□ 0.36
ERCC1-206ENST00000588300 TRMT61BQ9BVS5 477 aaKnown RBP17.31■□□□□ 0.36
ERCC1-206ENST00000588300 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-206ENST00000588300 TICRRQ7Z2Z1 1910 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 OR6C75A6NL08 312 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 TRAK2O60296 914 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 FAM189A1O60320 539 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
ERCC1-206ENST00000588300 PSMC3P17980 439 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 PLCG1P19174 1290 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 KCNA4P22459 653 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 ABCD1P33897 745 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 LONP1P36776 959 aaKnown RBP17.3■□□□□ 0.36
ERCC1-206ENST00000588300 RPS9P46781 194 aaKnown RBP17.3■□□□□ 0.36
ERCC1-206ENST00000588300 CSTF1Q05048 431 aaKnown RBP17.3■□□□□ 0.36
ERCC1-206ENST00000588300 ERMP1Q7Z2K6 904 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 BRAPQ7Z569 592 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 CD302Q8IX05 232 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 RAD54LQ92698 747 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 IRF7Q92985 503 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 MSTO1Q9BUK6 570 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
ERCC1-206ENST00000588300 EP300Q09472 2414 aaPredicted RBP17.3■□□□□ 0.36
ERCC1-206ENST00000588300 TSC2P49815 1807 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 A0A0B4J269 797 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 MAN2B1O00754 1011 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 NRG2O14511 850 aaPredicted RBP17.29■□□□□ 0.36
ERCC1-206ENST00000588300 SPTLC1O15269 473 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 TBCAO75347 108 aaKnown RBP17.29■□□□□ 0.36
ERCC1-206ENST00000588300 MOSPD3O75425 235 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 ADRB2P07550 413 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 OR4Q2P0C623 313 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 TYMPP19971 482 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 PAX3P23760 479 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 GUCY2FP51841 1108 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 GPR17Q13304 367 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 MCM6Q14566 821 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 KARSQ15046 597 aaKnown RBP17.29■□□□□ 0.36
ERCC1-206ENST00000588300 SPATA1Q5VX52 437 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 OVOS1Q6IE37 1185 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 VITQ6UXI7 678 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 MAP4K3Q8IVH8 894 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 ZSCAN18Q8TBC5 510 aaPredicted RBP17.29■□□□□ 0.36
ERCC1-206ENST00000588300 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
ERCC1-206ENST00000588300 RUBCNQ92622 972 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 FAM212AQ96EL1 285 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 ZSWIM3Q96MP5 696 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 PGLYRP2Q96PD5 576 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 GPR88Q9GZN0 384 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 SLITRK6Q9H5Y7 841 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
ERCC1-206ENST00000588300 WDR87Q6ZQQ6 2873 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 ANK1P16157 1881 aa17.29■□□□□ 0.36
ERCC1-206ENST00000588300 VNN2O95498 520 aa17.28■□□□□ 0.36
ERCC1-206ENST00000588300 ODC1P11926 461 aa17.28■□□□□ 0.36
ERCC1-206ENST00000588300 GJA1P17302 382 aa17.28■□□□□ 0.36
ERCC1-206ENST00000588300 GDI1P31150 447 aa17.28■□□□□ 0.36
ERCC1-206ENST00000588300 EPHB3P54753 998 aa17.28■□□□□ 0.36
ERCC1-206ENST00000588300 GTF2BQ00403 316 aa17.28■□□□□ 0.36
ERCC1-206ENST00000588300 DUSP4Q13115 394 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms