RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 C18orf25Q96B23 403 aaPredicted RBP11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 NAA15Q9BXJ9 866 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 BCO2Q9BYV7 579 aa11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 TTYH3Q9C0H2 523 aa11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 GANQ9H2C0 597 aa11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 BZW2Q9Y6E2 419 aaKnown RBP11.1□□□□□ -0.63
CLPTM1-207ENST00000587537 SYN3O14994 580 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 HUS1O60921 280 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 CLSTN1O94985 981 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 UPP2O95045 317 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 ODC1P11926 461 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 HNRNPH3P31942 346 aaKnown RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 STAT1P42224 750 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 LILRA4P59901 499 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 MYL6P60660 151 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 POLR2FP61218 127 aaKnown RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 SOX4Q06945 474 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 PDXDC1Q6P996 788 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 UNC93AQ86WB7 457 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 APPL2Q8NEU8 664 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 OR8K1Q8NGG5 319 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 SEMA4DQ92854 862 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 RNPC3Q96LT9 517 aaKnown RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 PANX2Q96RD6 677 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 PPP1R9BQ96SB3 815 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 SIX2Q9NPC8 291 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 UBE2TQ9NPD8 197 aaPredicted RBP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 MIOSQ9NXC5 875 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLPTM1-207ENST00000587537 CEP290O15078 2479 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 M0QZQ0 153 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 MFAP3LO75121 409 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 B3GAT3O94766 335 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 NOL4O94818 638 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 GYPCP04921 128 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 CYP11A1P05108 521 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 FERP16591 822 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 TYMPP19971 482 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 IBSPP21815 317 aaPredicted RBP11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 LHX1P48742 406 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 CLCNKBP51801 687 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 DEFB103AP81534 67 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 CDK17Q00537 523 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 INCA1Q0VD86 236 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 PPP1R2P3Q6NXS1 205 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 METTL23Q86XA0 190 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 FIBCD1Q8N539 461 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 SHC3Q92529 594 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 CLP1Q92989 425 aaKnown RBP11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 SUSD3Q96L08 255 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 ZNF558Q96NG5 402 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 DNAJC7Q99615 494 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 GDF15Q99988 308 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 NRDE2Q9H7Z3 1164 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 AIPL1Q9NZN9 384 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 ADAM28Q9UKQ2 775 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 CNTN6Q9UQ52 1028 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 PCDHB12Q9Y5F1 795 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 SCN1AP35498 2009 aa11.08□□□□□ -0.64
CLPTM1-207ENST00000587537 MKI67P46013 3256 aaKnown RBP11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 A0A1W2PPC1 479 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 CASTOR2A6NHX0 329 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 F8VZ95 297 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 TLL1O43897 1013 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 TADA2AO75478 443 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 GFPT2O94808 682 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 DDHD2O94830 711 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 GALTP07902 379 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 PAEPP09466 180 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 PCSK1P29120 753 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 CASP14P31944 242 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 KRT9P35527 623 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 SOX5P35711 763 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 ASPAP45381 313 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 OR1G1P47890 313 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 EPHB4P54760 987 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 JAM2P57087 298 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 CREMQ03060 361 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 RAPGEF1Q13905 1077 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 STILQ15468 1287 aa11.07□□□□□ -0.64
CLPTM1-207ENST00000587537 MEA1Q16626 185 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms