RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 GALNT9Q9HCQ5 603 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 FBXO34Q9NWN3 711 aa5.63□□□□□ -1.51
VMP1-205ENST00000587470 ZNF644Q9H582 1327 aaPredicted RBP5.63□□□□□ -1.51
VMP1-205ENST00000587470 PRSS23O95084 383 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 GPANK1O95872 356 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 FDXRP22570 491 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 MPLP40238 635 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 WASP42768 502 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 CXADRP78310 365 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 ATP8B2P98198 1209 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 SCAPQ12770 1279 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 HNRNPA0Q13151 305 aaKnown RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 MPP3Q13368 585 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 DACT2Q5SW24 774 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 FOXR2Q6PJQ5 311 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 GPR149Q86SP6 731 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 DDX42Q86XP3 938 aaKnown RBP eCLIP5.62□□□□□ -1.51
VMP1-205ENST00000587470 AFAP1Q8N556 730 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 ZGPATQ8N5A5 531 aaKnown RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 FITM2Q8N6M3 262 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 CNTD1Q8N815 330 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 PPM1NQ8N819 430 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 GSTO2Q9H4Y5 243 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 SPC25Q9HBM1 224 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 TBCCD1Q9NVR7 557 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 CFDP1Q9UEE9 299 aaPredicted RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 TESQ9UGI8 421 aaKnown RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 KCNE5Q9UJ90 142 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 INTUQ9ULD6 942 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 RUVBL1Q9Y265 456 aaKnown RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 MAST3O60307 1309 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 MYBBP1AQ9BQG0 1328 aaKnown RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 CCNB3Q8WWL7 1395 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 NCOA2Q15596 1464 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 EHBP1L1Q8N3D4 1523 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 REREQ9P2R6 1566 aa5.62□□□□□ -1.51
VMP1-205ENST00000587470 CEP170BQ9Y4F5 1589 aaPredicted RBP5.62□□□□□ -1.51
VMP1-205ENST00000587470 TYRP1P17643 537 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 CXCR5P32302 372 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 CLK3P49761 638 aaKnown RBP5.61□□□□□ -1.51
VMP1-205ENST00000587470 HNRNPMP52272 730 aaKnown RBP eCLIP5.61□□□□□ -1.51
VMP1-205ENST00000587470 ZNF142P52746 1687 aaPredicted RBP5.61□□□□□ -1.51
VMP1-205ENST00000587470 HSD11B2P80365 405 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 CLUL1Q15846 466 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 ATP2B3Q16720 1220 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 INAVAQ3KP66 663 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 FAM135BQ49AJ0 1406 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 PRR16Q569H4 304 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 ZNF518AQ6AHZ1 1483 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 NECAB2Q7Z6G3 386 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 ADGRG3Q86Y34 549 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 RHOT1Q8IXI2 618 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 NLGN4YQ8NFZ3 816 aaPredicted RBP5.61□□□□□ -1.51
VMP1-205ENST00000587470 NUP133Q8WUM0 1156 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 NRG4Q8WWG1 115 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 DPF2Q92785 391 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 RNF31Q96EP0 1072 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
VMP1-205ENST00000587470 CDC42BPBQ9Y5S2 1711 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 TNFRSF18Q9Y5U5 241 aa5.61□□□□□ -1.51
VMP1-205ENST00000587470 CDC42BPAQ5VT25 1732 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 MROH2AA6NES4 1674 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 RNF17Q9BXT8 1623 aaKnown RBP5.6□□□□□ -1.51
VMP1-205ENST00000587470 MBD5Q9P267 1494 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 KIAA1107Q9UPP5 1409 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 AATKQ6ZMQ8 1374 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 FBLP22087 321 aaKnown RBP5.6□□□□□ -1.51
VMP1-205ENST00000587470 CREMQ03060 361 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 CYP2A13Q16696 494 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 SLC44A3Q8N4M1 653 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 MARS2Q96GW9 593 aaKnown RBP5.6□□□□□ -1.51
VMP1-205ENST00000587470 Q96MF0 132 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 PNKPQ96T60 521 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 PTGFRNQ9P2B2 879 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 USP25Q9UHP3 1055 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 MTO1Q9Y2Z2 717 aaKnown RBP5.6□□□□□ -1.51
VMP1-205ENST00000587470 INSL6Q9Y581 213 aa5.6□□□□□ -1.51
VMP1-205ENST00000587470 COL11A2P13942 1736 aaPredicted RBP5.6□□□□□ -1.51
VMP1-205ENST00000587470 PREX2Q70Z35 1606 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 MYO3AQ8NEV4 1616 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 ARHGAP5Q13017 1502 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 LRRC7Q96NW7 1537 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 TCRBV7S2A1N4TA0A589 114 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 CCDC78A2IDD5 438 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 MYADML2A6NDP7 307 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 CTXN1P60606 82 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 MEX3CQ5U5Q3 659 aaKnown RBP5.59□□□□□ -1.51
VMP1-205ENST00000587470 C1orf162Q8NEQ5 155 aaPredicted RBP5.59□□□□□ -1.51
VMP1-205ENST00000587470 NACC2Q96BF6 587 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 MED15Q96RN5 788 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 MKS1Q9NXB0 559 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 ATP8A1Q9Y2Q0 1164 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 MYO5CQ9NQX4 1742 aa5.59□□□□□ -1.51
VMP1-205ENST00000587470 VWDEQ8N2E2 1590 aa5.59□□□□□ -1.52
VMP1-205ENST00000587470 A2ML1A8K2U0 1454 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 CDK12Q9NYV4 1490 aaPredicted RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 MYOM3Q5VTT5 1437 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 MIA2Q96PC5 1412 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 POLR1AO95602 1720 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms