RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	KRT39	Q6A163	491 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	TAS1R1	Q7RTX1	841 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	IRF2BP1	Q8IU81	584 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	TMEM130	Q8N3G9	435 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	MRPL43	Q8N983	215 aa	Known RBP	13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	APPL2	Q8NEU8	664 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	MYLIP	Q8WY64	445 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	PIK3R5	Q8WYR1	880 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	PPP2R3C	Q969Q6	453 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	SLC35C1	Q96A29	364 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	CNOT6L	Q96LI5	555 aa	Known RBP	13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	TTPAL	Q9BTX7	342 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	VRTN	Q9H8Y1	702 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	ENTPD7	Q9NQZ7	604 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	MRPL17	Q9NRX2	175 aa	Known RBP	13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	GDAP2	Q9NXN4	497 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	PCDHB8	Q9UN66	801 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	VWA8	A3KMH1	1905 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	ATG2A	Q2TAZ0	1938 aa		13.28	□□□□□ -0.28
PKN1-208	ENST00000586900	SPTLC1	O15269	473 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	P4HA2	O15460	535 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	PHACTR2	O75167	634 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	VNN1	O95497	513 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	CXCL14	O95715	111 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	PRKCSH	P14314	528 aa	Predicted RBP	13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	TYMP	P19971	482 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	IRS1	P35568	1242 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	GCLM	P48507	274 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	MYL5	Q02045	173 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	CREM	Q03060	361 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	BIRC3	Q13489	604 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	PTPN14	Q15678	1187 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	TCERG1L	Q5VWI1	586 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	KIAA1841	Q6NSI8	718 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	DSTYK	Q6XUX3	929 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	DPH6	Q7L8W6	267 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	SPATA18	Q8TC71	538 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	MICAL1	Q8TDZ2	1067 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	TAF4B	Q92750	862 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	HPDL	Q96IR7	371 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	FAM84A	Q96KN4	292 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	SENP8	Q96LD8	212 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	NSUN3	Q9H649	340 aa	Known RBP	13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	RXFP1	Q9HBX9	757 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	FNIP2	Q9P278	1114 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	DSE	Q9UL01	958 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	COQ4	Q9Y3A0	265 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	NFE2L3	Q9Y4A8	694 aa		13.27	□□□□□ -0.29
PKN1-208	ENST00000586900	FSD2	A1L4K1	749 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	C2orf71	A6NGG8	1288 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	SMTNL1	A8MU46	457 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	N4BP1	O75113	896 aa	Known RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	C1R	P00736	705 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	CYP11A1	P05108	521 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	FAM163B	P0C2L3	166 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	ODC1	P11926	461 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	FOSL2	P15408	326 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	IGFBP4	P22692	258 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	EEF1G	P26641	437 aa	Known RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	TKT	P29401	623 aa	Known RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	MXI1	P50539	228 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	NCOA4	Q13772	614 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	MRPL58	Q14197	206 aa	Known RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	SGSM1	Q2NKQ1	1148 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	RTP2	Q5QGT7	225 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	PLPP4	Q5VZY2	271 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	ANKS3	Q6ZW76	656 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	LIMS2	Q7Z4I7	341 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	FBXL13	Q8NEE6	735 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	LNX1	Q8TBB1	728 aa	Predicted RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	FAXDC2	Q96IV6	333 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	CDCA3	Q99618	268 aa	Predicted RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	XYLT2	Q9H1B5	865 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	SAMSN1	Q9NSI8	373 aa	Known RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	BACE2	Q9Y5Z0	518 aa		13.26	□□□□□ -0.29
PKN1-208	ENST00000586900	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	HIDE1	A8MVS5	230 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900		H7C4K7	107 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900		I3L4J1	428 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	CYB561D2	O14569	222 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	HUS1	O60921	280 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	OAZ2	O95190	189 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	ASS1	P00966	412 aa	Known RBP	13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	HLA-DRA	P01903	254 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	FMO5	P49326	533 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	ZNF165	P49910	485 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	MYL6	P60660	151 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	KCNH2	Q12809	1159 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	NCAPH	Q15003	741 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	VARS2	Q5ST30	1063 aa	Known RBP	13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	CDKAL1	Q5VV42	579 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	SCARA3	Q6AZY7	606 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	CEP57	Q86XR8	500 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	TMEM86A	Q8N2M4	240 aa		13.25	□□□□□ -0.29
PKN1-208	ENST00000586900	TOP6BL	Q8N6T0	577 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms