RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 I3L4J1 428 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 BIN1O00499 593 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 IKBKBO14920 756 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 PER2O15055 1255 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 SPTLC1O15269 473 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 LINC01565O15544 149 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 OAZ2O95190 189 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 STAU1O95793 577 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 TNNC2P02585 160 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 ITGB3P05106 788 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 TYMPP19971 482 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 PSMC2P35998 433 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 TAF6P49848 677 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 CLCN4P51793 760 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 FKBP3Q00688 224 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 SV2CQ496J9 727 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 C1orf220Q5T0J3 134 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 SLC8B1Q6J4K2 584 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 C15orf39Q6ZRI6 1047 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 USP37Q86T82 979 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 RBM23Q86U06 439 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 APPL2Q8NEU8 664 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 NOC3LQ8WTT2 800 aaKnown RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 ANKRD36BP1Q96IX9 119 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 TSG101Q99816 390 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 CLSTN3Q9BQT9 956 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 OXCT2Q9BYC2 517 aaPredicted RBP12.53□□□□□ -0.4
LRFN3-202ENST00000585876 DZANK1Q9NVP4 752 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 CLDND1Q9NY35 253 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
LRFN3-202ENST00000585876 BICDL2A1A5D9 508 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 LRRIQ3A6PVS8 624 aaPredicted RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 C2CD2LO14523 706 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 CETN3O15182 167 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 DLATP10515 647 aaKnown RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 ODC1P11926 461 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 HOXB8P17481 243 aaPredicted RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 RBP5P82980 135 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 DLX2Q07687 328 aaPredicted RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 BFSP1Q12934 665 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 PAK1Q13153 545 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 ADAM9Q13443 819 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 RAB33AQ14088 237 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 AAK1Q2M2I8 961 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 CEP135Q66GS9 1140 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 LILRA6Q6PI73 481 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 PRSS55Q6UWB4 352 aaPredicted RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 LIMS2Q7Z4I7 341 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 MLKLQ8NB16 471 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 SPATA18Q8TC71 538 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 HDAC7Q8WUI4 952 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 ZNF516Q92618 1163 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 CASP10Q92851 521 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 CCDC127Q96BQ5 260 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 CEP63Q96MT8 703 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.41
LRFN3-202ENST00000585876 VRTNQ9H8Y1 702 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 PRDM6Q9NQX0 595 aa12.52□□□□□ -0.41
LRFN3-202ENST00000585876 TCF20Q9UGU0 1960 aaKnown RBP12.51□□□□□ -0.41
LRFN3-202ENST00000585876 DOCK6Q96HP0 2047 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 DOCK8Q8NF50 2099 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 TRIM49BA6NDI0 452 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 KPNA7A9QM74 516 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 H7C4K7 107 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 GLUD1P00367 558 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 TNNI1P19237 187 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 KCNA5P22460 613 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 VAMP7P51809 220 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 DLG4P78352 724 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 RBM10P98175 930 aaKnown RBP12.51□□□□□ -0.41
LRFN3-202ENST00000585876 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
LRFN3-202ENST00000585876 ZACNQ401N2 412 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 TDRD10Q5VZ19 366 aaKnown RBP12.51□□□□□ -0.41
LRFN3-202ENST00000585876 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
LRFN3-202ENST00000585876 ISM2Q6H9L7 571 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 ZNF280DQ6N043 979 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 ANKRD54Q6NXT1 300 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 RSPO2Q6UXX9 243 aaPredicted RBP12.51□□□□□ -0.41
LRFN3-202ENST00000585876 RTL10Q7L3V2 364 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 CEP57Q86XR8 500 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 NELFBQ8WX92 580 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 SENP8Q96LD8 212 aa12.51□□□□□ -0.41
LRFN3-202ENST00000585876 POP1Q99575 1024 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms