RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ENTPD2Q9Y5L3 495 aa3.96□□□□□ -1.78
VAPA-208ENST00000584796 DISP3Q9P2K9 1392 aa3.96□□□□□ -1.78
VAPA-208ENST00000584796 PTPRMP28827 1452 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 A0A1W2PS29 197 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 TCRBV7S2A1N4TA0A589 114 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 DNAJC9-AS1A6NH13 148 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 EYA4O95677 639 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 ERBB2P04626 1255 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 FCER1AP12319 257 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 OSMP13725 252 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 WT1P19544 449 aaPredicted RBP3.95□□□□□ -1.78
VAPA-208ENST00000584796 DDCP20711 480 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 VWA1Q6PCB0 445 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 ZNF788Q6ZQV5 615 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 C1QL2Q7Z5L3 287 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 NOP9Q86U38 636 aaKnown RBP3.95□□□□□ -1.78
VAPA-208ENST00000584796 CCHCR1Q8TD31 782 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 SARAFQ96BY9 339 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 AHCYL2Q96HN2 611 aaKnown RBP3.95□□□□□ -1.78
VAPA-208ENST00000584796 MANSC1Q9H8J5 431 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 ZNF277Q9NRM2 450 aaPredicted RBP3.95□□□□□ -1.78
VAPA-208ENST00000584796 IL17RBQ9NRM6 502 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 PCDHGA2Q9Y5H1 932 aa3.95□□□□□ -1.78
VAPA-208ENST00000584796 MYBBP1AQ9BQG0 1328 aaKnown RBP3.95□□□□□ -1.78
VAPA-208ENST00000584796 SETD1BQ9UPS6 1966 aaKnown RBP3.94□□□□□ -1.78
VAPA-208ENST00000584796 CFAP43Q8NDM7 1665 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 CCDC151A5D8V7 595 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
VAPA-208ENST00000584796 YY2O15391 372 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 MPPED1O15442 326 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 HAUS5O94927 633 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 SLC6A4P31645 630 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 TMPRSS15P98073 1019 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 GRASPQ7Z6J2 395 aaPredicted RBP3.94□□□□□ -1.78
VAPA-208ENST00000584796 DCBLD1Q8N8Z6 715 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 NLGN4YQ8NFZ3 816 aaPredicted RBP3.94□□□□□ -1.78
VAPA-208ENST00000584796 TBC1D15Q8TC07 691 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 CHAC2Q8WUX2 184 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 C1QTNF7Q9BXJ2 289 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 C11orf54Q9H0W9 315 aaPredicted RBP3.94□□□□□ -1.78
VAPA-208ENST00000584796 GPR45Q9Y5Y3 372 aa3.94□□□□□ -1.78
VAPA-208ENST00000584796 PRAMEF33A0A0G2JMD5 474 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 K7ESF4 209 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 KIAA0391O15091 583 aaKnown RBP3.93□□□□□ -1.78
VAPA-208ENST00000584796 PRAMEF10O60809 474 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 PRKD3O94806 890 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 ITGB6P18564 788 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 WASP42768 502 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 MAPK10P53779 464 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 HSPA2P54652 639 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 CTXN1P60606 82 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 ERVK-21P61565 698 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 NBPF8Q3BBV2 869 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 EPHA10Q5JZY3 1008 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.93□□□□□ -1.78
VAPA-208ENST00000584796 LHFPL2Q6ZUX7 228 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 MICALCLQ6ZW33 695 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 PTF1AQ7RTS3 328 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 SCARB1Q8WTV0 552 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 TLR10Q9BXR5 811 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 INTS13Q9NVM9 706 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 VSX1Q9NZR4 365 aaPredicted RBP3.93□□□□□ -1.78
VAPA-208ENST00000584796 RNF7Q9UBF6 113 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 DNM3Q9UQ16 869 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 DISP1Q96F81 1524 aa3.93□□□□□ -1.78
VAPA-208ENST00000584796 FER1L4A9Z1Z3 1794 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 KDM5BQ9UGL1 1544 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 GPR39O43194 453 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 KCNA2P16389 499 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 AGXTP21549 392 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 GRIA3P42263 894 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 ABCG1P45844 678 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 MASP1P48740 699 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 CREMQ03060 361 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 ATP2B3Q16720 1220 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 AKNAD1Q5T1N1 836 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 KAZNQ674X7 775 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 CLNKQ7Z7G1 428 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 PEG10Q86TG7 708 aaKnown RBP3.92□□□□□ -1.78
VAPA-208ENST00000584796 LPIN2Q92539 896 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 SMG7Q92540 1137 aaKnown RBP3.92□□□□□ -1.78
VAPA-208ENST00000584796 C7orf25Q9BPX7 421 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 CTTNBP2NLQ9P2B4 639 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 NEU2Q9Y3R4 380 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 WRNQ14191 1432 aaPredicted RBP eCLIP3.92□□□□□ -1.78
VAPA-208ENST00000584796 RICTORQ6R327 1708 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 PLB1Q6P1J6 1458 aa3.92□□□□□ -1.78
VAPA-208ENST00000584796 KIAA0586Q9BVV6 1533 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 ORC4O43929 436 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 ELFN1P0C7U0 828 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 GPD1P21695 349 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 GATA3P23771 443 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 ITPKBP27987 946 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 SOX10P56693 466 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 RPS7P62081 194 aaKnown RBP3.91□□□□□ -1.78
VAPA-208ENST00000584796 SRSF4Q08170 494 aaKnown RBP3.91□□□□□ -1.78
VAPA-208ENST00000584796 TARDBPQ13148 414 aaKnown RBP eCLIP3.91□□□□□ -1.781e-10■■■■□ 23.3
VAPA-208ENST00000584796 PTPRRQ15256 657 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
VAPA-208ENST00000584796 SPATS2Q86XZ4 545 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms